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De novo assembly of the dual transcriptomes of a polymorphic raptor species and its malarial parasite.

Pauli, Martina ; Chakarov, Nayden LU ; Rupp, Oliver ; Kalinowski, Jörn ; Goesmann, Alexander ; Sorenson, Michael D ; Krüger, Oliver and Hoffman, Joseph Ivan (2015) In BMC Genomics 16.
Abstract
Studies of non-model species are important for understanding the molecular processes underpinning phenotypic variation under natural ecological conditions. The common buzzard (Buteo buteo; Aves: Accipitriformes) is a widespread and common Eurasian raptor with three distinct plumage morphs that differ in several fitness-related traits, including parasite infestation. To provide a genomic resource for plumage polymorphic birds in general and to search for candidate genes relating to fitness, we generated a transcriptome from a single dead buzzard specimen plus easily accessible, minimally invasive samples from live chicks.
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organization
publishing date
type
Contribution to journal
publication status
published
subject
in
BMC Genomics
volume
16
article number
1038
publisher
BioMed Central (BMC)
external identifiers
  • pmid:26645667
  • wos:000366100100001
  • scopus:84949676703
  • pmid:26645667
ISSN
1471-2164
DOI
10.1186/s12864-015-2254-1
language
English
LU publication?
yes
id
47bedd5f-86b8-4553-ba8a-541c884bf66a (old id 8505437)
date added to LUP
2016-04-01 13:27:50
date last changed
2022-03-29 07:36:20
@article{47bedd5f-86b8-4553-ba8a-541c884bf66a,
  abstract     = {{Studies of non-model species are important for understanding the molecular processes underpinning phenotypic variation under natural ecological conditions. The common buzzard (Buteo buteo; Aves: Accipitriformes) is a widespread and common Eurasian raptor with three distinct plumage morphs that differ in several fitness-related traits, including parasite infestation. To provide a genomic resource for plumage polymorphic birds in general and to search for candidate genes relating to fitness, we generated a transcriptome from a single dead buzzard specimen plus easily accessible, minimally invasive samples from live chicks.}},
  author       = {{Pauli, Martina and Chakarov, Nayden and Rupp, Oliver and Kalinowski, Jörn and Goesmann, Alexander and Sorenson, Michael D and Krüger, Oliver and Hoffman, Joseph Ivan}},
  issn         = {{1471-2164}},
  language     = {{eng}},
  publisher    = {{BioMed Central (BMC)}},
  series       = {{BMC Genomics}},
  title        = {{De novo assembly of the dual transcriptomes of a polymorphic raptor species and its malarial parasite.}},
  url          = {{http://dx.doi.org/10.1186/s12864-015-2254-1}},
  doi          = {{10.1186/s12864-015-2254-1}},
  volume       = {{16}},
  year         = {{2015}},
}