Mikael Akke
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- 2023
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Mark
Cosolvent Dimethyl Sulfoxide Influences Protein-Ligand Binding Kinetics via Solvent Viscosity Effects : Revealing the Success Rate of Complex Formation Following Diffusive Protein-Ligand Encounter
(
- Contribution to journal › Article
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Mark
Flexibility and Function of Distal Substrate-Binding Tryptophans in the Blue Mussel β-Mannanase MeMan5A and Their Role in Hydrolysis and Transglycosylation
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- Contribution to journal › Article
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Mark
Identification of Distinct Soluble States During Fibril Formation Using Multilinear Analysis of NMR Diffusion Data
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- Chapter in Book/Report/Conference proceeding › Book chapter
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Mark
Conformational Dynamics of Phytoglobin BvPgb1.2 from Beta vulgaris ssp. vulgaris
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- Contribution to journal › Article
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Mark
NMR Studies of Aromatic Ring Flips to Probe Conformational Fluctuations in Proteins
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- Contribution to journal › Scientific review
- 2022
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Mark
Bromodomain Interactions with Acetylated Histone 4 Peptides in the BRD4 Tandem Domain : Effects on Domain Dynamics and Internal Flexibility
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- Contribution to journal › Article
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Mark
Characterizing Fast Conformational Exchange of Aromatic Rings Using Residual Dipolar Couplings : Distinguishing Jumplike Flips from Other Exchange Mechanisms
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- Contribution to journal › Article
- 2021
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Mark
Structural characterization of the microbial enzyme urocanate reductase mediating imidazole propionate production
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- Contribution to journal › Article
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Mark
Rapid measurement of heteronuclear transverse relaxation rates using non-uniformly sampled R1ρ accordion experiments
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- Contribution to journal › Article
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Mark
1H R1ρ relaxation dispersion experiments in aromatic side chains
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- Contribution to journal › Article
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Mark
Mapping the energy landscape of protein-ligand binding via linear free energy relationships determined by protein NMR relaxation dispersion
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- Contribution to journal › Article
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Mark
Entropy–Entropy Compensation between the Protein, Ligand, and Solvent Degrees of Freedom Fine-Tunes Affinity in Ligand Binding to Galectin-3C
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- Contribution to journal › Article
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Mark
Transition-State Compressibility and Activation Volume of Transient Protein Conformational Fluctuations
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- Contribution to journal › Article
- 2020
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Mark
Ultrastructural evidence for self-replication of alzheimer-associated Aβ42 amyloid along the sides of fibrils
2020) In Proceedings of the National Academy of Sciences of the United States of America 117(21). p.11265-11273(
- Contribution to journal › Article
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Mark
Accurate Backbone 13C and 15N Chemical Shift Tensors in Galectin-3 Determined by MAS NMR and QM/MM : Details of Structure and Environment Matter
(
- Contribution to journal › Article
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Mark
Dynamic allosteric communication pathway directing differential activation of the glucocorticoid receptor
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- Contribution to journal › Article
- 2019
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Mark
Minute Additions of DMSO Affect Protein Dynamics Measurements by NMR Relaxation Experiments through Significant Changes in Solvent Viscosity
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- Contribution to journal › Article
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Mark
Rotamer jumps, proton exchange, and amine inversion dynamics of dimethylated lysine residues in proteins resolved by ph-dependent 1h and 13c nmr relaxation dispersion
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- Contribution to journal › Article
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Mark
Revealing Well-Defined Soluble States during Amyloid Fibril Formation by Multilinear Analysis of NMR Diffusion Data
(
- Contribution to journal › Article
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Mark
Rapid NMR Relaxation Rate Measurements Using Optimal Non-Uniform Sampling of Multi-Dimensional Accordion Data Analyzed by a Sparse Reconstruction Method
2019) In The Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory 123(27). p.5718-5723(
- Contribution to journal › Article
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Mark
Interplay between Conformational Entropy and Solvation Entropy in Protein-Ligand Binding
(
- Contribution to journal › Article
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Mark
Backbone
1
H,
13
C, and
15
N resonance assignments of BoMan26A, a β-mannanase of the glycoside hydrolase family 26 from the human gut bacterium Bacteroides ovatus
(
- Contribution to journal › Article
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Mark
Adsorption of unfolded Cu/Zn superoxide dismutase onto hydrophobic surfaces catalyzes its formation of amyloid fibrils
(
- Contribution to journal › Article
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Mark
Stability and Local Unfolding of SOD1 in the Presence of Protein Crowders
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- Contribution to journal › Article
- 2018
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Mark
Elucidation of Hydrogen Bonding Patterns in Ligand-Free, Lactose- and Glycerol-Bound Galectin-3C by Neutron Crystallography to Guide Drug Design
(
- Contribution to journal › Article
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Mark
Backbone 1H, 13C, and 15N resonance assignments of the ligand binding domain of the human wildtype glucocorticoid receptor and the F602S mutant variant
(
- Contribution to journal › Article
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Mark
Chemical Shifts of the Carbohydrate Binding Domain of Galectin-3 from Magic Angle Spinning NMR and Hybrid Quantum Mechanics/Molecular Mechanics Calculations
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- Contribution to journal › Article
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Mark
Conformational Entropy of FK506 Binding to FKBP12 Determined by Nuclear Magnetic Resonance Relaxation and Molecular Dynamics Simulations
(
- Contribution to journal › Article
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Mark
Systematic Tuning of Fluoro-galectin-3 Interactions Provides Thiodigalactoside Derivatives with Single-Digit nM Affinity and High Selectivity
(
- Contribution to journal › Article
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Mark
Designing interactions by control of protein-ligand complex conformation : Tuning arginine-arene interaction geometry for enhanced electrostatic protein-ligand interactions
(
- Contribution to journal › Article
- 2017
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Mark
Cu/Zn Superoxide Dismutase Forms Amyloid Fibrils under Near-Physiological Quiescent Conditions : The Roles of Disulfide Bonds and Effects of Denaturant
(
- Contribution to journal › Article
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Mark
Structural model of dodecameric heat-shock protein Hsp21 : Flexible N-terminal arms interact with client proteins while C-terminal tails maintain the dodecamer and chaperone activity
(
- Contribution to journal › Article
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Mark
The Dynameomics Entropy Dictionary : A Large-Scale Assessment of Conformational Entropy across Protein Fold Space
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- Contribution to journal › Article
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Mark
Dynamics of Aromatic Side Chains in the Active Site of FKBP12
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- Contribution to journal › Article
- 2016
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Mark
Structural Insights into the Calcium-Mediated Allosteric Transition in the C-Terminal Domain of Calmodulin from Nuclear Magnetic Resonance Measurements.
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- Contribution to journal › Article
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Mark
A de Novo Designed Coiled-Coil Peptide with a Reversible pH-Induced Oligomerization Switch
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- Contribution to journal › Article
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Mark
Molecular insights into substrate recognition and catalytic mechanism of the chaperone and FKBP peptidyl-prolyl isomerase SlyD
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- Contribution to journal › Article
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Mark
Structural analysis of a complex between small ubiquitin-like modifier 1 (SUMO1) and the ZZ domain of CREB-binding protein (CBP/p300) reveals a new interaction surface on SUMO
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- Contribution to journal › Article
- 2015
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Mark
Site-Specific Protonation Kinetics of Acidic Side Chains in Proteins Determined by pH-Dependent Carboxyl (13)C NMR Relaxation.
(
- Contribution to journal › Article
- 2014
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Mark
Multidimensional Cramér-Rao Lower Bound for Non-uniformly Sampled NMR Signals
2014) 22nd European Signal Processing Conference - EUSIPCO 2014(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
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Mark
Computational design of a leucine-rich repeat protein with a predefined geometry.
(
- Contribution to journal › Article
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Mark
Off-resonance rotating-frame relaxation dispersion experiment for (13)C in aromatic side chains using L-optimized TROSY-selection.
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- Contribution to journal › Article
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Mark
Conformational Entropies and Order Parameters: Convergence, Reproducibility, and Transferability
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- Contribution to journal › Article
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Mark
Ring Flips Revisited: C-13 Relaxation Dispersion Measurements of Aromatic Side Chain Dynamics and Activation Barriers in Basic Pancreatic Trypsin Inhibitor
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- Contribution to journal › Article
- 2013
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Mark
Local Unfolding and Aggregation Mechanisms of SOD1: A Monte Carlo Exploration.
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- Contribution to journal › Article
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Mark
Protein conformational exchange measured by (1)H R 1ρ relaxation dispersion of methyl groups.
(
- Contribution to journal › Article
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Mark
Slow Aromatic Ring Flips Detected Despite Near-Degenerate NMR Frequencies of the Exchanging Nuclei.
(
- Contribution to journal › Article
- 2012
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Mark
Specific (CD2CD2SCHD2)-C-12-D-beta-C-12-D-gamma-C-13-H-epsilon Isotopomer Labeling of Methionine To Characterize Protein Dynamics by H-1 and C-13 NMR Relaxation Dispersion
(
- Contribution to journal › Article
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Mark
Conformational dynamics and thermodynamics of protein-ligand binding studied by NMR relaxation.
(
- Contribution to journal › Article
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Mark
(13)C relaxation experiments for aromatic side chains employing longitudinal- and transverse-relaxation optimized NMR spectroscopy.
(
- Contribution to journal › Article