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- 2024
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Mark
Comparison of histological delineations of medial temporal lobe cortices by four independent neuroanatomy laboratories
2024) In Hippocampus(
- Contribution to journal › Article
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Mark
What is a blink? : Classifying and characterizing blinks in eye openness signals
2024) In Behavior Research Methods(
- Contribution to journal › Article
-
Mark
Identification of microbial pathogens in Neolithic Scandinavian humans
(
- Contribution to journal › Article
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Mark
Epigenetic modulators link mitochondrial redox homeostasis to cardiac function in a sex-dependent manner
(
- Contribution to journal › Article
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Mark
Pathogen-mediated selection in the immune system of rodents : Exploring selection targets, functional effects and trade-offs
2024)(
- Thesis › Doctoral thesis (compilation)
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Mark
Proteomic analysis of Parkinson’s disease mechanism and biomarkers
2024)(
- Thesis › Doctoral thesis (compilation)
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Mark
T-cell commitment inheritance—an agent-based multi-scale model
(
- Contribution to journal › Article
- 2023
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Mark
Historical RNA expression profiles from the extinct Tasmanian tiger
(
- Contribution to journal › Article
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Mark
VariBench, new variation benchmark categories and data sets
(
- Contribution to journal › Article
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Mark
Modeling cancer’s ecological and evolutionary dynamics
(
- Contribution to journal › Article
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Mark
805P Tumor-informed ctDNA detection as a predictive marker for postoperative residual disease in epithelial ovarian cancer: A feasibility study
(
- Contribution to journal › Published meeting abstract
-
Mark
Protein family neighborhood analyzer-ProFaNA
(
- Contribution to journal › Article
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Mark
AliGater : a framework for the development of bioinformatic pipelines for large-scale, high-dimensional cytometry data
(
- Contribution to journal › Article
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Mark
Computational modelling in systems biology: from rewriting cell fates to detecting tumours
2023)(
- Thesis › Doctoral thesis (compilation)
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Mark
BALDR : A Web-based platform for informed comparison and prioritization of biomarker candidates for type 2 diabetes mellitus
(
- Contribution to journal › Article
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Mark
Preoperative ctDNA Levels Are Associated With Poor Overall Survival in Patients With Ovarian Cancer
(
- Contribution to journal › Article
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Mark
Expanding the genetic toolbox of Rhodotorula toruloides by identification and validation of six novel promoters induced or repressed under nitrogen starvation
(
- Contribution to journal › Article
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Mark
A model of cue integration as vector summation in the insect brain
(
- Contribution to journal › Article
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Mark
The structural basis of hyperpromiscuity in a core combinatorial network of type II toxin-antitoxin and related phage defense systems
2023) In Proceedings of the National Academy of Sciences of the United States of America 120(33). p.1-12(
- Contribution to journal › Article
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Mark
uORF4u : a tool for annotation of conserved upstream open reading frames
(
- Contribution to journal › Article
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Mark
Generalized precursor prediction boosts identification rates and accuracy in mass spectrometry based proteomics
(
- Contribution to journal › Article
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Mark
AIRR community curation and standardised representation for immunoglobulin and T cell receptor germline sets
(
- Contribution to journal › Article
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Mark
Identification of Novel Biomarkers for Response to Preoperative Chemoradiation in Locally Advanced Rectal Cancer with Genetic Algorithm–Based Gene Selection
(
- Contribution to journal › Article
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Mark
A Mitosome With Distinct Metabolism in the Uncultured Protist Parasite Paramikrocytos canceri (Rhizaria, Ascetosporea)
(
- Contribution to journal › Article
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Mark
Roadmap to the study of gene and protein phylogeny and evolution—A practical guide
(
- Contribution to journal › Article
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Mark
AI-Driven Drug Response Prediction for Personalized Cancer Medicine
(
- Chapter in Book/Report/Conference proceeding › Book chapter
-
Mark
A draft Diabrotica virgifera virgifera genome : insights into control and host plant adaption by a major maize pest insect
(
- Contribution to journal › Article
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Mark
Sag-rad : A Method for Single-Cell Population Genomics of Unicellular Eukaryotes
(
- Contribution to journal › Article
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Mark
Rapid Profiling of Protein Complex Reorganization in Perturbed Systems
(
- Contribution to journal › Article
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Mark
Annotating and making use of the Avena sativa cv. Sang reference genome
2023)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Abstract 5710: Detection and monitoring of t(11;14) in liquid biopsies from patients with relapsed/refractory multiple myeloma treated with venetoclax-based regimens
(
- Contribution to journal › Published meeting abstract
- 2022
-
Mark
The genome sequence of the white admiral, Limenitis camilla (Linnaeus, 1764)
(
- Contribution to journal › Debate/Note/Editorial
-
Mark
Genetic Predisposition to Sporadic and Familial Multiple Myeloma
2022) In Lund University, Faculty of Medicine Doctoral Dissertation Series(
- Thesis › Doctoral thesis (compilation)
-
Mark
PRC2-mediated repression is essential to maintain identity and function of differentiated dopaminergic and serotonergic neurons
(
- Contribution to journal › Article
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Mark
MHCtools – an R package for MHC high-throughput sequencing data : Genotyping, haplotype and supertype inference, and downstream genetic analyses in non-model organisms
2022) In Molecular Ecology Resources(
- Contribution to journal › Article
-
Mark
High-throughput muscle fiber typing from RNA sequencing data
(
- Contribution to journal › Article
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Mark
ProTstab2 for Prediction of Protein Thermal Stabilities
(
- Contribution to journal › Article
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Mark
An analytical pipeline to support robust research on the ecology, evolution, and function of floral volatiles
(
- Contribution to journal › Article
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Mark
Rhizobium etli CFN42 proteomes showed isoenzymes in free-living and symbiosis with a different transcriptional regulation inferred from a transcriptional regulatory network
(
- Contribution to journal › Article
-
Mark
Adaptive Immune Receptor Repertoire (AIRR) Community Guide to TR and IG Gene Annotation
(
- Chapter in Book/Report/Conference proceeding › Book chapter
-
Mark
Analysing high-throughput sequencing data in Python with HTSeq 2.0
(
- Contribution to journal › Article
-
Mark
PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions
(
- Contribution to journal › Article
-
Mark
Clinical associations of ESR2 (estrogen receptor beta) expression across thousands of primary breast tumors
(
- Contribution to journal › Article
-
Mark
Alternative splicing modulation by G-quadruplexes
(
- Contribution to journal › Article
- 2021
-
Mark
Systematics for types and effects of RNA variations
(
- Contribution to journal › Article
-
Mark
A quantitative model of cellular decision making in direct neuronal reprogramming
(
- Contribution to journal › Article
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Mark
Contaminations contaminate common databases
(
- Contribution to journal › Article
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Mark
Reindeer control over subarctic treeline alters soil fungal communities with potential consequences for soil carbon storage
(
- Contribution to journal › Article
-
Mark
A community effort to identify and correct mislabeled samples in proteogenomic studies
(
- Contribution to journal › Article
-
Mark
FS-GBDT : identification multicancer-risk module via a feature selection algorithm by integrating Fisher score and GBDT
(
- Contribution to journal › Article
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Mark
Multi-scale Dynamical Modeling of T Cell Development from an Early Thymic Progenitor State to Lineage Commitment
(
- Contribution to journal › Article
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Mark
Preexisting Somatic Mutations of Estrogen Receptor Alpha (ESR1) in Early-Stage Primary Breast Cancer
(
- Contribution to journal › Article
-
Mark
The impact of cross-kingdom molecular forensics on genetic privacy
(
- Contribution to journal › Article
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Mark
RNA Sequencing for Molecular Diagnostics in Breast Cancer
2021) In Lund University, Faculty of Medicine Doctoral Dissertation Series(
- Thesis › Doctoral thesis (compilation)
-
Mark
Tissue-specific transcriptional imprinting and heterogeneity in human innate lymphoid cells revealed by full-length single-cell RNA-sequencing
(
- Contribution to journal › Article
-
Mark
Quality issues in georeferencing : From physical collections to digital data repositories for ecological research
(
- Contribution to journal › Letter
-
Mark
The value of human data annotation for machine learning based anomaly detection in environmental systems
(
- Contribution to journal › Article
-
Mark
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)
(
- Contribution to journal › Article
-
Mark
ZEAL : protein structure alignment based on shape similarity
(
- Contribution to journal › Article
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Mark
Modeling Nonlinear Dendritic Processing of Facilitation in a Dragonfly Target-Tracking Neuron
(
- Contribution to journal › Article
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Mark
A unified platform to manage, share, and archive morphological and functional data in insect neuroscience
(
- Contribution to journal › Article
-
Mark
ArGSLab : a tool for analyzing experimental or simulated particle networks
(
- Contribution to journal › Article
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Mark
PEPRF : Identification of Essential Proteins by Integrating Topological Features of PPI Network and Sequence-based Features via Random Forest
(
- Contribution to journal › Article
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Mark
The Sedimentary Geochemistry and Paleoenvironments Project
(
- Contribution to journal › Article
-
Mark
Role of CRISPR/Cas9 and other gene editing/engineering technology in intestine diseases
2021) p.75-86(
- Chapter in Book/Report/Conference proceeding › Book chapter
- 2020
-
Mark
Panel 1: Biotechnology, biomedical engineering and new models of otitis media
2020) 20th International Symposium on Recent Advances in Otitis Media In International Journal of Pediatric Otorhinolaryngology 130(1).(
- Contribution to journal › Article
-
Mark
The mutational landscape of the SCAN‐B real‐world primary breast cancer transcriptome
(
- Contribution to journal › Article
-
Mark
Features of increased malignancy in eosinophilic clear cell renal cell carcinoma
(
- Contribution to journal › Article
-
Mark
Development and Validation of CRISPR Activator Systems for Overexpression of CB1 Receptors in Neurons
(
- Contribution to journal › Article
-
Mark
Variation benchmark datasets : update, criteria, quality and applications
(
- Contribution to journal › Article
-
Mark
An integrated transcriptomic- and proteomic-based approach to evaluate the human skin sensitization potential of glyphosate and its commercial agrochemical formulations
(
- Contribution to journal › Article
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Mark
A crowdsourced set of curated structural variants for the human genome
(
- Contribution to journal › Article
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Mark
Heritability of Caries Scores, Trajectories, and Disease Subtypes
(
- Contribution to journal › Article
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Mark
Guidelines for systematic reporting of sequence alignments
(
- Contribution to journal › Article
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Mark
Proliferation and benevolence—A framework for dissecting the mechanisms of microbial virulence and health promotion
(
- Contribution to journal › Article
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Mark
Problems in variation interpretation guidelines and in their implementation in computational tools
(
- Contribution to journal › Article
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Mark
MuscleAtlasExplorer : a web service for studying gene expression in human skeletal muscle
(
- Contribution to journal › Article
-
Mark
Genomic basis for RNA alterations in cancer
(
- Contribution to journal › Article
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Mark
precisionFDA Truth Challenge V2: Calling variants from short- and long-reads in difficult-to-map regions
2020)(
- Working paper/Preprint › Preprint in preprint archive
-
Mark
The use of molecular methods in studies of avian haemosporidians
2020) p.113-135(
- Chapter in Book/Report/Conference proceeding › Book chapter
- 2019
-
Mark
SMSSVD : SubMatrix Selection Singular Value Decomposition
(
- Contribution to journal › Article
-
Mark
Uncertainty quantification, propagation and characterization by Bayesian analysis combined with global sensitivity analysis applied to dynamical intracellular pathway models
(
- Contribution to journal › Article
-
Mark
Kinetic models of hematopoietic differentiation
(
- Contribution to journal › Scientific review
-
Mark
A new evolutionary rough fuzzy integrated machine learning technique for microRNA selection using next-generation sequencing data of breast cancer
(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
-
Mark
Genomics of host-pathogen interactions : challenges and opportunities across ecological and spatiotemporal scales
2019) In PeerJ Preprints(
- Contribution to journal › Article
-
Mark
Production and utilisation of prebiotic oligosaccharides : Applied bioinformatics of glycoside hydrolases
2019)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Decay of connection probabilities with distance in 2D and 3D neuronal networks
(
- Contribution to journal › Article
-
Mark
A urinary extracellular vesicle microRNA biomarker discovery pipeline; from automated extracellular vesicle enrichment by acoustic trapping to microRNA sequencing
(
- Contribution to journal › Article
-
Mark
How adaptive plasticity evolves when selected against
(
- Contribution to journal › Article
-
Mark
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
(
- Contribution to journal › Article
-
Mark
Inferred Allelic Variants of Immunoglobulin Receptor Genes : A System for Their Evaluation, Documentation, and Naming
(
- Contribution to journal › Scientific review
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Mark
First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study
(
- Contribution to journal › Article
-
Mark
Alpha-1-acid glycoprotein 1 is upregulated in pancreatic ductal adenocarcinoma and confers a poor prognosis
(
- Contribution to journal › Article
-
Mark
Biological interpretations of the biphasic model of ontogenetic brain-body allometry : A reply to Packard
(
- Contribution to journal › Article
-
Mark
RTNduals an R/Bioconductor package for analysis of co-regulation and inference of dual regulons
(
- Contribution to journal › Letter
-
Mark
MPRAscore : robust and non-parametric analysis of massively parallel reporter assays
(
- Contribution to journal › Article
-
Mark
A novel conserved family of Macro-like domains—putative new players in ADP-ribosylation signaling
(
- Contribution to journal › Article
-
Mark
Amyloid and tau accumulate across distinct spatial networks and are differentially associated with brain connectivity
(
- Contribution to journal › Article
-
Mark
SVCurator: A Crowdsourcing app to visualize evidence of structural variants for the human genome
2019)(
- Working paper/Preprint › Preprint in preprint archive
- 2018
-
Mark
A novel model for protein sequence similarity analysis based on spectral radius
(
- Contribution to journal › Article