Genomic position mapping discrepancies of commercial SNP chips.
(2012) In PLoS ONE 7(2).- Abstract
- The field of genetics has come to rely heavily on commercial genotyping arrays and accompanying annotations for insights into genotype-phenotype associations. However, in order to avoid errors and false leads, it is imperative that the annotation of SNP chromosomal positions is accurate and unambiguous. We report on genomic positional discrepancies of various SNP chips for human, cattle and mouse species, and discuss their causes and consequences.
Please use this url to cite or link to this publication:
https://lup.lub.lu.se/record/2432529
- author
- Fadista, Joao LU and Bendixen, Christian
- organization
- publishing date
- 2012
- type
- Contribution to journal
- publication status
- published
- subject
- in
- PLoS ONE
- volume
- 7
- issue
- 2
- article number
- e31025
- publisher
- Public Library of Science (PLoS)
- external identifiers
-
- wos:000302853600101
- pmid:22363540
- scopus:84857179035
- pmid:22363540
- ISSN
- 1932-6203
- DOI
- 10.1371/journal.pone.0031025
- language
- English
- LU publication?
- yes
- id
- 1f6c2a1c-2940-43a3-afd6-cd2bcbf75ece (old id 2432529)
- alternative location
- http://www.ncbi.nlm.nih.gov/pubmed/22363540?dopt=Abstract
- date added to LUP
- 2016-04-01 13:13:23
- date last changed
- 2024-02-24 20:01:36
@article{1f6c2a1c-2940-43a3-afd6-cd2bcbf75ece,
abstract = {{The field of genetics has come to rely heavily on commercial genotyping arrays and accompanying annotations for insights into genotype-phenotype associations. However, in order to avoid errors and false leads, it is imperative that the annotation of SNP chromosomal positions is accurate and unambiguous. We report on genomic positional discrepancies of various SNP chips for human, cattle and mouse species, and discuss their causes and consequences.}},
author = {{Fadista, Joao and Bendixen, Christian}},
issn = {{1932-6203}},
language = {{eng}},
number = {{2}},
publisher = {{Public Library of Science (PLoS)}},
series = {{PLoS ONE}},
title = {{Genomic position mapping discrepancies of commercial SNP chips.}},
url = {{https://lup.lub.lu.se/search/files/3237986/2858379.pdf}},
doi = {{10.1371/journal.pone.0031025}},
volume = {{7}},
year = {{2012}},
}