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Genomic position mapping discrepancies of commercial SNP chips.

Fadista, Joao LU and Bendixen, Christian (2012) In PLoS ONE 7(2).
Abstract
The field of genetics has come to rely heavily on commercial genotyping arrays and accompanying annotations for insights into genotype-phenotype associations. However, in order to avoid errors and false leads, it is imperative that the annotation of SNP chromosomal positions is accurate and unambiguous. We report on genomic positional discrepancies of various SNP chips for human, cattle and mouse species, and discuss their causes and consequences.
Please use this url to cite or link to this publication:
author
organization
publishing date
type
Contribution to journal
publication status
published
subject
in
PLoS ONE
volume
7
issue
2
publisher
Public Library of Science
external identifiers
  • wos:000302853600101
  • pmid:22363540
  • scopus:84857179035
ISSN
1932-6203
DOI
10.1371/journal.pone.0031025
language
English
LU publication?
yes
id
1f6c2a1c-2940-43a3-afd6-cd2bcbf75ece (old id 2432529)
alternative location
http://www.ncbi.nlm.nih.gov/pubmed/22363540?dopt=Abstract
date added to LUP
2012-04-02 10:43:14
date last changed
2017-01-01 05:32:34
@article{1f6c2a1c-2940-43a3-afd6-cd2bcbf75ece,
  abstract     = {The field of genetics has come to rely heavily on commercial genotyping arrays and accompanying annotations for insights into genotype-phenotype associations. However, in order to avoid errors and false leads, it is imperative that the annotation of SNP chromosomal positions is accurate and unambiguous. We report on genomic positional discrepancies of various SNP chips for human, cattle and mouse species, and discuss their causes and consequences.},
  articleno    = {e31025},
  author       = {Fadista, Joao and Bendixen, Christian},
  issn         = {1932-6203},
  language     = {eng},
  number       = {2},
  publisher    = {Public Library of Science},
  series       = {PLoS ONE},
  title        = {Genomic position mapping discrepancies of commercial SNP chips.},
  url          = {http://dx.doi.org/10.1371/journal.pone.0031025},
  volume       = {7},
  year         = {2012},
}