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Ca2+ binding and conformational changes in a calmodulin domain

Evenäs, Johan LU ; Malmendal, Anders LU ; Thulin, Eva LU ; Carlström, Göran LU orcid and Forsén, Sture LU (1998) In Biochemistry 37(39). p.13744-13754
Abstract

Calcium activation of the C-terminal domain of calmodulin was studied using 1H and 15N NMR spectroscopy. The important role played by the conserved bidentate glutmate Ca2+ ligand in the binding loops is emphasized by the striking effects resulting from a mutation of this glutantic acid to a glutamine, i.e. E104Q in loop III and E140Q in loop IV. The study involves determination of Ca2+ binding constants, assignments, and structural characterizations of the apo, (Ca2+)1, and (Ca2+)2 states of the E104Q mutant and comparisons to the wild-type protein and the E140Q mutant [Evenas et al. (1997) Biochemistry 36, 3448-3457]. NMR titration data show... (More)

Calcium activation of the C-terminal domain of calmodulin was studied using 1H and 15N NMR spectroscopy. The important role played by the conserved bidentate glutmate Ca2+ ligand in the binding loops is emphasized by the striking effects resulting from a mutation of this glutantic acid to a glutamine, i.e. E104Q in loop III and E140Q in loop IV. The study involves determination of Ca2+ binding constants, assignments, and structural characterizations of the apo, (Ca2+)1, and (Ca2+)2 states of the E104Q mutant and comparisons to the wild-type protein and the E140Q mutant [Evenas et al. (1997) Biochemistry 36, 3448-3457]. NMR titration data show sequential Ca2+ binding in the E104Q mutant. The first Ca2+ binds to loop IV and the second to loop III, which is the order reverse to that observed for the E140Q mutant. In both mutants, the major structural changes occur upon Ca2+ binding to loop IV, which implies a different response to Ca2+ binding in the N- and C-terminal EF-hands. Spectral characteristics show that the (Ca2+)1 and (Ca2+)2 states of the E104Q mutant undergo global exchange on a 10-100 μs time scale between conformations seemingly similar to the closed and open structures of this domain in wild-type calmodulin, paralleling earlier observations for the (Ca2+)2 state of the E140Q mutant, indicating that both glutamic acid residues, E104 and E140, are required for stabilization of the open conformation in the (Ca2+)2 state. To verify that the NOE constraints cannot be fulfilled in a single structure, solution structures of the (Ca2+)2 state of the E104Q mutant are calculated. Within the ensemble of structures the precision is good. However, the clearly dynamic nature of the state, a large number of violated distance restraints, ill-defined secondary structural elements, and comparisons to the structures of calmodulin indicate that the ensemble does not provide a good picture of the (Ca2+)2 state of the E104Q mutant but rather represents the distance- averaged structure of at least two distinct different conformations.

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organization
publishing date
type
Contribution to journal
publication status
published
subject
in
Biochemistry
volume
37
issue
39
pages
11 pages
publisher
The American Chemical Society (ACS)
external identifiers
  • scopus:0032578352
  • pmid:9753463
ISSN
0006-2960
DOI
10.1021/bi9806448
language
English
LU publication?
yes
id
2a33657f-03b9-4c45-b822-1a72c591dc97
date added to LUP
2019-07-25 21:36:25
date last changed
2024-04-30 18:32:41
@article{2a33657f-03b9-4c45-b822-1a72c591dc97,
  abstract     = {{<p>Calcium activation of the C-terminal domain of calmodulin was studied using <sup>1</sup>H and <sup>15</sup>N NMR spectroscopy. The important role played by the conserved bidentate glutmate Ca<sup>2+</sup> ligand in the binding loops is emphasized by the striking effects resulting from a mutation of this glutantic acid to a glutamine, i.e. E104Q in loop III and E140Q in loop IV. The study involves determination of Ca<sup>2+</sup> binding constants, assignments, and structural characterizations of the apo, (Ca<sup>2+</sup>)<sub>1</sub>, and (Ca<sup>2+</sup>)<sub>2</sub> states of the E104Q mutant and comparisons to the wild-type protein and the E140Q mutant [Evenas et al. (1997) Biochemistry 36, 3448-3457]. NMR titration data show sequential Ca<sup>2+</sup> binding in the E104Q mutant. The first Ca<sup>2+</sup> binds to loop IV and the second to loop III, which is the order reverse to that observed for the E140Q mutant. In both mutants, the major structural changes occur upon Ca<sup>2+</sup> binding to loop IV, which implies a different response to Ca<sup>2+</sup> binding in the N- and C-terminal EF-hands. Spectral characteristics show that the (Ca<sup>2+</sup>)<sub>1</sub> and (Ca<sup>2+</sup>)<sub>2</sub> states of the E104Q mutant undergo global exchange on a 10-100 μs time scale between conformations seemingly similar to the closed and open structures of this domain in wild-type calmodulin, paralleling earlier observations for the (Ca<sup>2+</sup>)<sub>2</sub> state of the E140Q mutant, indicating that both glutamic acid residues, E104 and E140, are required for stabilization of the open conformation in the (Ca<sup>2+</sup>)<sub>2</sub> state. To verify that the NOE constraints cannot be fulfilled in a single structure, solution structures of the (Ca2+)<sub>2</sub> state of the E104Q mutant are calculated. Within the ensemble of structures the precision is good. However, the clearly dynamic nature of the state, a large number of violated distance restraints, ill-defined secondary structural elements, and comparisons to the structures of calmodulin indicate that the ensemble does not provide a good picture of the (Ca<sup>2+</sup>)<sub>2</sub> state of the E104Q mutant but rather represents the distance- averaged structure of at least two distinct different conformations.</p>}},
  author       = {{Evenäs, Johan and Malmendal, Anders and Thulin, Eva and Carlström, Göran and Forsén, Sture}},
  issn         = {{0006-2960}},
  language     = {{eng}},
  month        = {{09}},
  number       = {{39}},
  pages        = {{13744--13754}},
  publisher    = {{The American Chemical Society (ACS)}},
  series       = {{Biochemistry}},
  title        = {{Ca<sup>2+</sup> binding and conformational changes in a calmodulin domain}},
  url          = {{http://dx.doi.org/10.1021/bi9806448}},
  doi          = {{10.1021/bi9806448}},
  volume       = {{37}},
  year         = {{1998}},
}