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RankViaContact: ranking and visualization of amino acid contacts.

Shen, Bairong and Vihinen, Mauno LU (2003) In Bioinformatics1998-01-01+01:00 19(16). p.2161-2162
Abstract
SUMMARY: RankViaContact is a web service for calculation of residue-residue contact energies in proteins based on a coarse-grained model, and for visualization of interactions. The service provides information about ranked contact energies of residues, coordination numbers and the relative solvent accessibility of selected residues, as well as sequence and structure information. The program can be used to design stabilizing mutations, to analyze residue-residue contacts and to study the consequences of mutations. AVAILABILITY: http://bioinf.uta.fi/Rank.htm.
Please use this url to cite or link to this publication:
author
publishing date
type
Contribution to journal
publication status
published
subject
keywords
Amino Acids: chemistry, Amino Acids: classification, Proteins: chemistry, Proteins: classification
in
Bioinformatics1998-01-01+01:00
volume
19
issue
16
pages
2161 - 2162
publisher
Oxford University Press
external identifiers
  • pmid:14594727
  • scopus:0242391985
ISSN
1367-4803
language
English
LU publication?
no
id
5e7492ee-4f6e-4cd1-a7d4-452d3c8f4cd6 (old id 3635548)
alternative location
http://www.ncbi.nlm.nih.gov/pubmed/14594727?dopt=Abstract
date added to LUP
2013-06-12 16:04:13
date last changed
2018-05-29 11:09:05
@article{5e7492ee-4f6e-4cd1-a7d4-452d3c8f4cd6,
  abstract     = {SUMMARY: RankViaContact is a web service for calculation of residue-residue contact energies in proteins based on a coarse-grained model, and for visualization of interactions. The service provides information about ranked contact energies of residues, coordination numbers and the relative solvent accessibility of selected residues, as well as sequence and structure information. The program can be used to design stabilizing mutations, to analyze residue-residue contacts and to study the consequences of mutations. AVAILABILITY: http://bioinf.uta.fi/Rank.htm.},
  author       = {Shen, Bairong and Vihinen, Mauno},
  issn         = {1367-4803},
  keyword      = {Amino Acids: chemistry,Amino Acids: classification,Proteins: chemistry,Proteins: classification},
  language     = {eng},
  number       = {16},
  pages        = {2161--2162},
  publisher    = {Oxford University Press},
  series       = {Bioinformatics1998-01-01+01:00},
  title        = {RankViaContact: ranking and visualization of amino acid contacts.},
  volume       = {19},
  year         = {2003},
}