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Three new genera of the Ramalinaceae (lichen-forming Ascomycota) and the phenomenon of presence of ‘extraneous mycobiont DNA’ in lichen associations

Kondratyuk, Sergey Y. ; Lőkös, László ; Farkas, Edit ; Jang, S.-H. ; Liu, Dong ; Halda, Josef ; Persson, Per-Erik ; Hansson, Mats LU ; Kärnefelt, Ingvar LU and Thell, Arne LU , et al. (2019) In Acta Botanica Hungarica 61(3-4). p.275-323
Abstract
Three new genera Coppinsidea, Vandenboomia and Wolseleyidea are described and the genera Ivanpisutia, Lecaniella and Myrionora are resurrected on the basis of a phylogenetic analysisof multi-locus sequence data of the Ramalinaceae including the nuclear protein-codingmarker rpb2, the internal transcribed spacer and a fragment of the small mitochondrialsubunit. The genus Hertelidea was positioned within the Ramalina clade of the phylogenetic tree of the Ramalinaceae. Bacidia sipmanii, Phyllopsora chlorophaea, P. castaneocincta and Ramalina subbreviuscula were recorded from South Korea for the first time here confirming by molecular data, too.Forty-eight new combinations are proposed: Bacidia alnetorum (basionym: Biatora
alnetorum S.... (More)
Three new genera Coppinsidea, Vandenboomia and Wolseleyidea are described and the genera Ivanpisutia, Lecaniella and Myrionora are resurrected on the basis of a phylogenetic analysisof multi-locus sequence data of the Ramalinaceae including the nuclear protein-codingmarker rpb2, the internal transcribed spacer and a fragment of the small mitochondrialsubunit. The genus Hertelidea was positioned within the Ramalina clade of the phylogenetic tree of the Ramalinaceae. Bacidia sipmanii, Phyllopsora chlorophaea, P. castaneocincta and Ramalina subbreviuscula were recorded from South Korea for the first time here confirming by molecular data, too.Forty-eight new combinations are proposed: Bacidia alnetorum (basionym: Biatora
alnetorum S. Ekman et Tønsberg), Biatora amazonica (basionym: Phyllopsora amazonica Kistenich et Timdal), Biatora cuyabensis (basionym: Lecidea cuyabensis Malme), Biatora halei (basionym: Pannaria halei Tuck.), Biatora kalbii (basionym: Phyllopsora kalbii Brako), Biatora subhispidula (basionym: Psoroma subhispidulum Nyl.), Coppinsidea alba (basionym: Catillaria alba Coppins et Vězda), Coppinsidea aphana (basionym: Lecidea aphana Nyl.), Coppinsidea croatica (basionym: Catillaria croatica Zahlbr.), Coppinsidea fuscoviridis (basionym: Bilimbia fuscoviridis Anzi), Coppinsidea pallens (basionym: Bilimbia pallens Kullh.), Coppinsidea ropalosporoides
(basionym: Gyalidea ropalosporoides S. Y. Kondr., L. Lőkös et J.-S. Hur), Coppinsidea scotinodes (basionym: Lecidea scotinodes Nyl.), Coppinsidea sphaerella (basionym: Lecidea sphaerella Hedl.), Ivanpisutia hypophaea (basionym: Biatora hypophaea Printzen et Tønsberg), Ivanpisutia ocelliformis (basionym: Lecidea ocelliformis Nyl.), Lecaniella belgica (basionym: Lecania belgica van den Boom et Reese Naesb.), Lecaniella cyrtellina (basionym: Lecanora cyrtellina Nyl.), Lecaniella dubitans (basionym: Lecidea dubitans Nyl.), Lecaniella erysibe (basionym: Lichen
erysibe Ach.), Lecaniella hutchinsiae (basionym: Lecanora hutchinsiae Nyl.), Lecaniella naegelii(basionym: Biatora naegelii Hepp), Lecaniella prasinoides (basionym: Lecania prasinoides Elenkin), Lecaniella sylvestris (basionym: Biatora sylvestris Arnold), Lecaniella tenera (basionym: Scoliciosporum tenerum Lönnr.), Mycobilimbia albohyalina (basionym: Lecidea anomala f. albohyalina Nyl.), Mycobilimbia cinchonarum (basionym: Triclinum cinchonarum Fée), Mycobilimbia concinna (basionym: Phyllopsora concinna Kistenich et Timdal), Mycobilimbia ramea (basionym:
Bacidina ramea S. Ekman), Mycobilimbia siamensis (basionym: Phyllopsora siamensis
Kistenich et Timdal), Myrionora australis (basionym: Biatora australis Rodr. Flakus et Printzen), Myrionora ementiens (basionym: Lecidea ementiens Nyl.), Myrionora flavopunctata (basionym: Lecanora flavopunctata Tønsberg), Myrionora globulosa (basionym: Lecidea globulosa Flörke), Myrionora hemipolia (basionym: Lecidea arceutina f. hemipolia Nyl.), Myrionora lignimollis (basionym: Biatora ligni-mollis T. Sprib. et Printzen), Myrionora malcolmii (basionym: Phyllopsora malcolmii Vězda et Kalb), Myrionora vacciniicola (basionym: Lecidea vacciniicola Tønsberg), Phyllopsora agonimioides (basionym: Coenogonium agonimioides J. P. Halda, S.-O. Oh et J.-S. Hur), Phyllopsora sunchonensis (basionym: Agonimia sunchonensis S. Y. Kondr. et
J.-S. Hur), Vandenboomia chlorotiza (basionym: Lecidea chlorotiza Nyl.), Vandenboomia falcata (basionym: Lecania falcata van den Boom, M. Brand, Coppins, Magain et Sérus.), Wolseleyidea africana (basionym: Phyllopsora africana Timdal et Krog), Wolseleyidea byssiseda (basionym: Lecidea byssiseda Nyl. ex Hue), Wolseleyidea canoumbrina (basionym: Lecidea canoumbrina Vain.), Wolseleyidea furfurella (basionym: Phyllopsora furfurella Kistenich et Timdal), Wolseleyidea ochroxantha (basionym: Lecidea ochroxantha Nyl.), and Wolseleyidea swinscowii (basionym: Phyllopsora swinscowii Timdal et Krog). The combination Biatora longispora (Degel.)
Lendemer et Printzen is validated here. The new names Biatora vezdana for Lecania
furfuracea Vĕzda and Coppinsidea vainioana for Lecidea sphaeroidiza Vain. are proposed. The phenomenon of presence of ‘extraneous mycobiont DNA’ in lichen association, i.e. DNA, belonging neither to mycobiont nor photobiont or to endophytic fungi is for the first time illustrated. So the presence of nrITS and mtSSU sequences of crustose lichen Coppinsidea ropalosporoides in thalli of crustose Verrucaria margacea and foliose Kashiwadia orientalis, as well as nrITS of Phyllopsora sp. KoLRI in Agonimia pacifica and Biatora longispora, or nrITS and mtSSU of Biatora longispora in thalli of Agonimia pacifica, Oxneriopsis oxneri and Pyxine limbulata, Ivanpisutia oxneri in thalli of Rinodina xanthophaea, etc. is documented. Scarce cases of presence of ‘extraneous mycobiont DNA’ in representatives of the Teloschistaceae, Physciaceae known from literature data are discussed, too. (Less)
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publication status
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subject
keywords
Agonimia, Bacidia, Biatora, Coppinsidea, Ivanpisutia, Lecania, Lecaniella, Mycobilimbia, Myrionora
in
Acta Botanica Hungarica
volume
61
issue
3-4
pages
275 - 323
publisher
Akademiai Kiado
external identifiers
  • scopus:85079219885
ISSN
1588-2578
DOI
10.1556/034.61.2019.3-4.5
language
English
LU publication?
yes
id
3a9c835a-1191-4c24-b5ed-47e04f39cda8
date added to LUP
2019-10-18 09:42:27
date last changed
2021-01-06 08:37:07
@article{3a9c835a-1191-4c24-b5ed-47e04f39cda8,
  abstract     = {Three new genera Coppinsidea, Vandenboomia and Wolseleyidea are described and the genera Ivanpisutia, Lecaniella and Myrionora are resurrected on the basis of a phylogenetic analysisof multi-locus sequence data of the Ramalinaceae including the nuclear protein-codingmarker rpb2, the internal transcribed spacer and a fragment of the small mitochondrialsubunit. The genus Hertelidea was positioned within the Ramalina clade of the phylogenetic tree of the Ramalinaceae. Bacidia sipmanii, Phyllopsora chlorophaea, P. castaneocincta and Ramalina subbreviuscula were recorded from South Korea for the first time here confirming by molecular data, too.Forty-eight new combinations are proposed: Bacidia alnetorum (basionym: Biatora<br/>alnetorum S. Ekman et Tønsberg), Biatora amazonica (basionym: Phyllopsora amazonica Kistenich et Timdal), Biatora cuyabensis (basionym: Lecidea cuyabensis Malme), Biatora halei (basionym: Pannaria halei Tuck.), Biatora kalbii (basionym: Phyllopsora kalbii Brako), Biatora subhispidula (basionym: Psoroma subhispidulum Nyl.), Coppinsidea alba (basionym: Catillaria alba Coppins et Vězda), Coppinsidea aphana (basionym: Lecidea aphana Nyl.), Coppinsidea croatica (basionym: Catillaria croatica Zahlbr.), Coppinsidea fuscoviridis (basionym: Bilimbia fuscoviridis Anzi), Coppinsidea pallens (basionym: Bilimbia pallens Kullh.), Coppinsidea ropalosporoides<br/>(basionym: Gyalidea ropalosporoides S. Y. Kondr., L. Lőkös et J.-S. Hur), Coppinsidea scotinodes (basionym: Lecidea scotinodes Nyl.), Coppinsidea sphaerella (basionym: Lecidea sphaerella Hedl.), Ivanpisutia hypophaea (basionym: Biatora hypophaea Printzen et Tønsberg), Ivanpisutia ocelliformis (basionym: Lecidea ocelliformis Nyl.), Lecaniella belgica (basionym: Lecania belgica van den Boom et Reese Naesb.), Lecaniella cyrtellina (basionym: Lecanora cyrtellina Nyl.), Lecaniella dubitans (basionym: Lecidea dubitans Nyl.), Lecaniella erysibe (basionym: Lichen<br/>erysibe Ach.), Lecaniella hutchinsiae (basionym: Lecanora hutchinsiae Nyl.), Lecaniella naegelii(basionym: Biatora naegelii Hepp), Lecaniella prasinoides (basionym: Lecania prasinoides Elenkin), Lecaniella sylvestris (basionym: Biatora sylvestris Arnold), Lecaniella tenera (basionym: Scoliciosporum tenerum Lönnr.), Mycobilimbia albohyalina (basionym: Lecidea anomala f. albohyalina Nyl.), Mycobilimbia cinchonarum (basionym: Triclinum cinchonarum Fée), Mycobilimbia concinna (basionym: Phyllopsora concinna Kistenich et Timdal), Mycobilimbia ramea (basionym:<br/>Bacidina ramea S. Ekman), Mycobilimbia siamensis (basionym: Phyllopsora siamensis<br/>Kistenich et Timdal), Myrionora australis (basionym: Biatora australis Rodr. Flakus et Printzen), Myrionora ementiens (basionym: Lecidea ementiens Nyl.), Myrionora flavopunctata (basionym: Lecanora flavopunctata Tønsberg), Myrionora globulosa (basionym: Lecidea globulosa Flörke), Myrionora hemipolia (basionym: Lecidea arceutina f. hemipolia Nyl.), Myrionora lignimollis (basionym: Biatora ligni-mollis T. Sprib. et Printzen), Myrionora malcolmii (basionym: Phyllopsora malcolmii Vězda et Kalb), Myrionora vacciniicola (basionym: Lecidea vacciniicola Tønsberg), Phyllopsora agonimioides (basionym: Coenogonium agonimioides J. P. Halda, S.-O. Oh et J.-S. Hur), Phyllopsora sunchonensis (basionym: Agonimia sunchonensis S. Y. Kondr. et<br/>J.-S. Hur), Vandenboomia chlorotiza (basionym: Lecidea chlorotiza Nyl.), Vandenboomia falcata (basionym: Lecania falcata van den Boom, M. Brand, Coppins, Magain et Sérus.), Wolseleyidea africana (basionym: Phyllopsora africana Timdal et Krog), Wolseleyidea byssiseda (basionym: Lecidea byssiseda Nyl. ex Hue), Wolseleyidea canoumbrina (basionym: Lecidea canoumbrina Vain.), Wolseleyidea furfurella (basionym: Phyllopsora furfurella Kistenich et Timdal), Wolseleyidea ochroxantha (basionym: Lecidea ochroxantha Nyl.), and Wolseleyidea swinscowii (basionym: Phyllopsora swinscowii Timdal et Krog). The combination Biatora longispora (Degel.)<br/>Lendemer et Printzen is validated here. The new names Biatora vezdana for Lecania<br/>furfuracea Vĕzda and Coppinsidea vainioana for Lecidea sphaeroidiza Vain. are proposed. The phenomenon of presence of ‘extraneous mycobiont DNA’ in lichen association, i.e. DNA, belonging neither to mycobiont nor photobiont or to endophytic fungi is for the first time illustrated. So the presence of nrITS and mtSSU sequences of crustose lichen Coppinsidea ropalosporoides in thalli of crustose Verrucaria margacea and foliose Kashiwadia orientalis, as well as nrITS of Phyllopsora sp. KoLRI in Agonimia pacifica and Biatora longispora, or nrITS and mtSSU of Biatora longispora in thalli of Agonimia pacifica, Oxneriopsis oxneri and Pyxine limbulata, Ivanpisutia oxneri in thalli of Rinodina xanthophaea, etc. is documented. Scarce cases of presence of ‘extraneous mycobiont DNA’ in representatives of the Teloschistaceae, Physciaceae known from literature data are discussed, too.},
  author       = {Kondratyuk, Sergey Y. and Lőkös, László and Farkas, Edit and Jang, S.-H. and Liu, Dong and Halda, Josef and Persson, Per-Erik and Hansson, Mats and Kärnefelt, Ingvar and Thell, Arne and Hur, Jae-Seoun},
  issn         = {1588-2578},
  language     = {eng},
  number       = {3-4},
  pages        = {275--323},
  publisher    = {Akademiai Kiado},
  series       = {Acta Botanica Hungarica},
  title        = {Three new genera of the Ramalinaceae (lichen-forming Ascomycota) and the phenomenon of presence of ‘extraneous mycobiont DNA’ in lichen associations},
  url          = {http://dx.doi.org/10.1556/034.61.2019.3-4.5},
  doi          = {10.1556/034.61.2019.3-4.5},
  volume       = {61},
  year         = {2019},
}