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DIANA - algorithmic improvements for analysis of data-independent acquisition MS data.

Teleman, Johan LU ; Röst, Hannes; Rosenberger, George; Schmitt, Uwe; Malmström, Lars; Malmström, Johan LU and Levander, Fredrik LU (2015) In Bioinformatics 31(4). p.555-562
Abstract
Data independent acquisition mass spectrometry has emerged as a reproducible and sensitive alternative in quantitative proteomics, where parsing the highly complex tandem mass spectra requires dedicated algorithms. Recently, targeted data extraction was proposed as a novel analysis strategy for this type of data, but it is important to further develop these concepts to provide quality-controlled, interference-adjusted and sensitive peptide quantification.
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author
organization
publishing date
type
Contribution to journal
publication status
published
subject
in
Bioinformatics
volume
31
issue
4
pages
555 - 562
publisher
Oxford University Press
external identifiers
  • pmid:25348213
  • wos:000350059600013
  • scopus:84928999619
ISSN
1367-4803
DOI
10.1093/bioinformatics/btu686
language
English
LU publication?
yes
id
038e61a8-4f79-4b84-a4a6-abecc72e36d8 (old id 4733189)
alternative location
http://www.ncbi.nlm.nih.gov/pubmed/25348213?dopt=Abstract
date added to LUP
2014-11-10 19:16:06
date last changed
2017-09-17 04:01:51
@article{038e61a8-4f79-4b84-a4a6-abecc72e36d8,
  abstract     = {Data independent acquisition mass spectrometry has emerged as a reproducible and sensitive alternative in quantitative proteomics, where parsing the highly complex tandem mass spectra requires dedicated algorithms. Recently, targeted data extraction was proposed as a novel analysis strategy for this type of data, but it is important to further develop these concepts to provide quality-controlled, interference-adjusted and sensitive peptide quantification.},
  author       = {Teleman, Johan and Röst, Hannes and Rosenberger, George and Schmitt, Uwe and Malmström, Lars and Malmström, Johan and Levander, Fredrik},
  issn         = {1367-4803},
  language     = {eng},
  number       = {4},
  pages        = {555--562},
  publisher    = {Oxford University Press},
  series       = {Bioinformatics},
  title        = {DIANA - algorithmic improvements for analysis of data-independent acquisition MS data.},
  url          = {http://dx.doi.org/10.1093/bioinformatics/btu686},
  volume       = {31},
  year         = {2015},
}