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Functional expression of a multisubstrate deoxyribonucleoside kinase from Drosophila melanogaster and its C-terminal deletion mutants

Munch-Petersen, B LU ; Knecht, W LU ; Lenz, C ; Søndergaard, Leif and Piskur, J LU (2000) In The Journal of biological chemistry 275(9). p.6673-6679
Abstract

The occurrence of a deoxyribonucleoside kinase in Drosophila melanogaster (Dm-dNK) with remarkably broad substrate specificity has recently been indicated (Munch-Petersen, B., Piskur, J., and Søndergaard, L. (1998) J. Biol. Chem. 273, 3926-3931). To prove that the capacity to phosphorylate all four deoxyribonucleosides is in fact associated to one polypeptide chain, partially sequenced cDNA clones, originating from the Berkeley Drosophila genome sequencing project, were searched for homology with human deoxyribonucleoside kinases. The total sequence of one cDNA clone and the corresponding genomic DNA was determined and expressed in Escherichia coli as a glutathione S-transferase fusion protein. The purified and thrombin cleaved... (More)

The occurrence of a deoxyribonucleoside kinase in Drosophila melanogaster (Dm-dNK) with remarkably broad substrate specificity has recently been indicated (Munch-Petersen, B., Piskur, J., and Søndergaard, L. (1998) J. Biol. Chem. 273, 3926-3931). To prove that the capacity to phosphorylate all four deoxyribonucleosides is in fact associated to one polypeptide chain, partially sequenced cDNA clones, originating from the Berkeley Drosophila genome sequencing project, were searched for homology with human deoxyribonucleoside kinases. The total sequence of one cDNA clone and the corresponding genomic DNA was determined and expressed in Escherichia coli as a glutathione S-transferase fusion protein. The purified and thrombin cleaved recombinant protein phosphorylated the four deoxyribonucleosides with high turnover and K(m) values similar to those of the native Dm-dNK, as well as the four ribonucleosides and many therapeutical nucleoside analogs. Dm-dNK has apparently the same origin as the mammalian kinases, thymidine kinase 2, deoxycytidine kinase, deoxyguanosine kinase, and the herpes viral thymidine kinases, but it has a unique C terminus that seems to be important for catalytic activity and specificity. The C-terminal 20 amino acids were dispensable for phosphorylation of deoxyribonucleosides but necessary for full activity with purine ribonucleosides. Removal of the C-terminal 20 amino acids increased the specific activity 2-fold, but 99% of the activity was lost after removal of the C-terminal 30 amino acids.

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author
; ; ; and
publishing date
type
Contribution to journal
publication status
published
keywords
Amino Acids/analysis, Animals, Cloning, Molecular, Deoxyribonucleosides/metabolism, Drosophila melanogaster/enzymology, Escherichia coli, Kinetics, Molecular Sequence Data, Phosphorylation, Phosphotransferases (Alcohol Group Acceptor)/chemistry, Recombinant Fusion Proteins, Sequence Alignment, Sequence Deletion, Substrate Specificity
in
The Journal of biological chemistry
volume
275
issue
9
pages
6673 - 6679
publisher
American Society for Biochemistry and Molecular Biology
external identifiers
  • scopus:0034092788
  • pmid:10692477
ISSN
0021-9258
DOI
10.1074/jbc.275.9.6673
language
English
LU publication?
no
id
4de15fff-238d-4701-8d56-e672315ffba4
date added to LUP
2020-07-22 14:33:38
date last changed
2024-04-03 11:52:19
@article{4de15fff-238d-4701-8d56-e672315ffba4,
  abstract     = {{<p>The occurrence of a deoxyribonucleoside kinase in Drosophila melanogaster (Dm-dNK) with remarkably broad substrate specificity has recently been indicated (Munch-Petersen, B., Piskur, J., and Søndergaard, L. (1998) J. Biol. Chem. 273, 3926-3931). To prove that the capacity to phosphorylate all four deoxyribonucleosides is in fact associated to one polypeptide chain, partially sequenced cDNA clones, originating from the Berkeley Drosophila genome sequencing project, were searched for homology with human deoxyribonucleoside kinases. The total sequence of one cDNA clone and the corresponding genomic DNA was determined and expressed in Escherichia coli as a glutathione S-transferase fusion protein. The purified and thrombin cleaved recombinant protein phosphorylated the four deoxyribonucleosides with high turnover and K(m) values similar to those of the native Dm-dNK, as well as the four ribonucleosides and many therapeutical nucleoside analogs. Dm-dNK has apparently the same origin as the mammalian kinases, thymidine kinase 2, deoxycytidine kinase, deoxyguanosine kinase, and the herpes viral thymidine kinases, but it has a unique C terminus that seems to be important for catalytic activity and specificity. The C-terminal 20 amino acids were dispensable for phosphorylation of deoxyribonucleosides but necessary for full activity with purine ribonucleosides. Removal of the C-terminal 20 amino acids increased the specific activity 2-fold, but 99% of the activity was lost after removal of the C-terminal 30 amino acids.</p>}},
  author       = {{Munch-Petersen, B and Knecht, W and Lenz, C and Søndergaard, Leif and Piskur, J}},
  issn         = {{0021-9258}},
  keywords     = {{Amino Acids/analysis; Animals; Cloning, Molecular; Deoxyribonucleosides/metabolism; Drosophila melanogaster/enzymology; Escherichia coli; Kinetics; Molecular Sequence Data; Phosphorylation; Phosphotransferases (Alcohol Group Acceptor)/chemistry; Recombinant Fusion Proteins; Sequence Alignment; Sequence Deletion; Substrate Specificity}},
  language     = {{eng}},
  month        = {{03}},
  number       = {{9}},
  pages        = {{6673--6679}},
  publisher    = {{American Society for Biochemistry and Molecular Biology}},
  series       = {{The Journal of biological chemistry}},
  title        = {{Functional expression of a multisubstrate deoxyribonucleoside kinase from Drosophila melanogaster and its C-terminal deletion mutants}},
  url          = {{http://dx.doi.org/10.1074/jbc.275.9.6673}},
  doi          = {{10.1074/jbc.275.9.6673}},
  volume       = {{275}},
  year         = {{2000}},
}