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T-bet-expressing Tr1 cells driven by dietary signals dominate the small intestinal immune landscape

Ansaldo, Eduard ; Yong, Daniel ; Carrillo, Nathan ; McFadden, Taryn ; Abid, Mahnoor ; Corral, Dan ; Rivera, Claudia ; Farley, Taylor ; Bouladoux, Nicolas and Gribonika, Inta LU orcid , et al. (2026) In Proceedings of the National Academy of Sciences of the United States of America 123(2).
Abstract

Intestinal immunity defends against enteric pathogens, mediates symbiotic relationships with the resident microbiota, and provides tolerance to food antigens, safeguarding critical nutrient absorption and barrier functions of this mucosal tissue. Despite the abundance of tissue resident activated T cells, their contributions to these various roles remain poorly understood. Here, we identify a dominant population of IL-10 producing, T-bet-expressing Tr1 T cells, residing in the small intestinal lamina propria at homeostasis. Remarkably, these intestinal Tr1 cells emerge at the time of weaning and accumulate independently of the microbiota displaying similar abundance, function, and TCR repertoire under germ-free conditions. Instead, the... (More)

Intestinal immunity defends against enteric pathogens, mediates symbiotic relationships with the resident microbiota, and provides tolerance to food antigens, safeguarding critical nutrient absorption and barrier functions of this mucosal tissue. Despite the abundance of tissue resident activated T cells, their contributions to these various roles remain poorly understood. Here, we identify a dominant population of IL-10 producing, T-bet-expressing Tr1 T cells, residing in the small intestinal lamina propria at homeostasis. Remarkably, these intestinal Tr1 cells emerge at the time of weaning and accumulate independently of the microbiota displaying similar abundance, function, and TCR repertoire under germ-free conditions. Instead, the small intestinal T-bet+ Tr1 program is driven and shaped by dietary antigens, and accumulates in a cDC1-IL-27-dependent manner. Upon activation, these cells robustly express IL-10 and multiple inhibitory receptors, establishing a distinct suppressive profile. Altogether, this work uncovers a previously unappreciated dominant player in homeostatic small intestinal immunity with the potential to play critical suppressive roles in this tissue, raising important implications for the understanding of immune regulation in the intestine.

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publishing date
type
Contribution to journal
publication status
published
keywords
Animals, Mice, Intestine, Small/immunology, Interleukin-10/metabolism, T-Box Domain Proteins/metabolism, T-bet Transcription Factor, Intestinal Mucosa/immunology, T-Lymphocytes, Regulatory/immunology, Homeostasis, Mice, Inbred C57BL, Diet, Immunity, Mucosal
in
Proceedings of the National Academy of Sciences of the United States of America
volume
123
issue
2
article number
e2520747122
publisher
National Academy of Sciences
external identifiers
  • scopus:105026951662
  • pmid:41499395
ISSN
1091-6490
DOI
10.1073/pnas.2520747122
language
English
LU publication?
no
id
5dd85bc0-f4f5-4e1f-8741-bfdfe16bc143
date added to LUP
2026-01-12 11:37:04
date last changed
2026-02-04 04:01:18
@article{5dd85bc0-f4f5-4e1f-8741-bfdfe16bc143,
  abstract     = {{<p>Intestinal immunity defends against enteric pathogens, mediates symbiotic relationships with the resident microbiota, and provides tolerance to food antigens, safeguarding critical nutrient absorption and barrier functions of this mucosal tissue. Despite the abundance of tissue resident activated T cells, their contributions to these various roles remain poorly understood. Here, we identify a dominant population of IL-10 producing, T-bet-expressing Tr1 T cells, residing in the small intestinal lamina propria at homeostasis. Remarkably, these intestinal Tr1 cells emerge at the time of weaning and accumulate independently of the microbiota displaying similar abundance, function, and TCR repertoire under germ-free conditions. Instead, the small intestinal T-bet+ Tr1 program is driven and shaped by dietary antigens, and accumulates in a cDC1-IL-27-dependent manner. Upon activation, these cells robustly express IL-10 and multiple inhibitory receptors, establishing a distinct suppressive profile. Altogether, this work uncovers a previously unappreciated dominant player in homeostatic small intestinal immunity with the potential to play critical suppressive roles in this tissue, raising important implications for the understanding of immune regulation in the intestine.</p>}},
  author       = {{Ansaldo, Eduard and Yong, Daniel and Carrillo, Nathan and McFadden, Taryn and Abid, Mahnoor and Corral, Dan and Rivera, Claudia and Farley, Taylor and Bouladoux, Nicolas and Gribonika, Inta and Belkaid, Yasmine}},
  issn         = {{1091-6490}},
  keywords     = {{Animals; Mice; Intestine, Small/immunology; Interleukin-10/metabolism; T-Box Domain Proteins/metabolism; T-bet Transcription Factor; Intestinal Mucosa/immunology; T-Lymphocytes, Regulatory/immunology; Homeostasis; Mice, Inbred C57BL; Diet; Immunity, Mucosal}},
  language     = {{eng}},
  month        = {{01}},
  number       = {{2}},
  publisher    = {{National Academy of Sciences}},
  series       = {{Proceedings of the National Academy of Sciences of the United States of America}},
  title        = {{T-bet-expressing Tr1 cells driven by dietary signals dominate the small intestinal immune landscape}},
  url          = {{http://dx.doi.org/10.1073/pnas.2520747122}},
  doi          = {{10.1073/pnas.2520747122}},
  volume       = {{123}},
  year         = {{2026}},
}