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Human protein reference database as a discovery resource for proteomics

Peri, Suraj ; Navarro, J Daniel ; Kristiansen, Troels Z ; Amanchy, Ramars ; Surendranath, Vineeth ; Muthusamy, Babylakshmi ; Gandhi, T K B ; Chandrika, K N ; Deshpande, Nandan and Suresh, Shubha , et al. (2004) In Nucleic Acids Research 32(Database issue). p.497-501
Abstract

The rapid pace at which genomic and proteomic data is being generated necessitates the development of tools and resources for managing data that allow integration of information from disparate sources. The Human Protein Reference Database (http://www.hprd.org) is a web-based resource based on open source technologies for protein information about several aspects of human proteins including protein-protein interactions, post-translational modifications, enzyme-substrate relationships and disease associations. This information was derived manually by a critical reading of the published literature by expert biologists and through bioinformatics analyses of the protein sequence. This database will assist in biomedical discoveries by serving... (More)

The rapid pace at which genomic and proteomic data is being generated necessitates the development of tools and resources for managing data that allow integration of information from disparate sources. The Human Protein Reference Database (http://www.hprd.org) is a web-based resource based on open source technologies for protein information about several aspects of human proteins including protein-protein interactions, post-translational modifications, enzyme-substrate relationships and disease associations. This information was derived manually by a critical reading of the published literature by expert biologists and through bioinformatics analyses of the protein sequence. This database will assist in biomedical discoveries by serving as a resource of genomic and proteomic information and providing an integrated view of sequence, structure, function and protein networks in health and disease.

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publishing date
type
Contribution to journal
publication status
published
keywords
Computational Biology, Databases, Protein, Disease, Genomics, Humans, Information Storage and Retrieval, Internet, Protein Binding, Protein Processing, Post-Translational, Proteins, Proteome, Proteomics, Substrate Specificity, Vocabulary, Controlled
in
Nucleic Acids Research
volume
32
issue
Database issue
pages
497 - 501
publisher
Oxford University Press
external identifiers
  • scopus:9144236198
  • pmid:14681466
ISSN
1362-4962
DOI
10.1093/nar/gkh070
language
English
LU publication?
no
id
6bf3d924-4ae6-4d9b-a054-b6f8d5c2e37d
date added to LUP
2017-06-16 09:51:47
date last changed
2024-03-31 11:38:40
@article{6bf3d924-4ae6-4d9b-a054-b6f8d5c2e37d,
  abstract     = {{<p>The rapid pace at which genomic and proteomic data is being generated necessitates the development of tools and resources for managing data that allow integration of information from disparate sources. The Human Protein Reference Database (http://www.hprd.org) is a web-based resource based on open source technologies for protein information about several aspects of human proteins including protein-protein interactions, post-translational modifications, enzyme-substrate relationships and disease associations. This information was derived manually by a critical reading of the published literature by expert biologists and through bioinformatics analyses of the protein sequence. This database will assist in biomedical discoveries by serving as a resource of genomic and proteomic information and providing an integrated view of sequence, structure, function and protein networks in health and disease.</p>}},
  author       = {{Peri, Suraj and Navarro, J Daniel and Kristiansen, Troels Z and Amanchy, Ramars and Surendranath, Vineeth and Muthusamy, Babylakshmi and Gandhi, T K B and Chandrika, K N and Deshpande, Nandan and Suresh, Shubha and Rashmi, B. P. and Shanker, K and Padma, N and Niranjan, Vidya and Harsha, H C and Talreja, Naveen and Vrushabendra, B M and Ramya, M A and Yatish, A J and Joy, Mary and Shivashankar, H N and Kavitha, M P and Menezes, Minal and Choudhury, Dipanwita Roy and Ghosh, Neelanjana and Saravana, R and Chandran, Sreenath and Mohan, S Sujatha and Jonnalagadda, Chandra Kiran and Prasad, C K and Kumar-Sinha, Chandan and Deshpande, Krishna S and Pandey, Akhilesh}},
  issn         = {{1362-4962}},
  keywords     = {{Computational Biology; Databases, Protein; Disease; Genomics; Humans; Information Storage and Retrieval; Internet; Protein Binding; Protein Processing, Post-Translational; Proteins; Proteome; Proteomics; Substrate Specificity; Vocabulary, Controlled}},
  language     = {{eng}},
  month        = {{01}},
  number       = {{Database issue}},
  pages        = {{497--501}},
  publisher    = {{Oxford University Press}},
  series       = {{Nucleic Acids Research}},
  title        = {{Human protein reference database as a discovery resource for proteomics}},
  url          = {{http://dx.doi.org/10.1093/nar/gkh070}},
  doi          = {{10.1093/nar/gkh070}},
  volume       = {{32}},
  year         = {{2004}},
}