Skip to main content

Lund University Publications

LUND UNIVERSITY LIBRARIES

Jena Soil Model (JSM v1.0; revision 1934): a microbial soil organic carbon model integrated with nitrogen and phosphorus processes

Yu, Lin LU ; Ahrens, Bernhard ; Wutzler, Thomas ; Schrumpf, Marion and Zaehle, Sönke (2020) In Geoscientific Model Development 13(2). p.783-803
Abstract
Plant–soil interactions, such as the coupling of plants' below-ground biomass allocation with soil organic matter (SOM) decomposition, nutrient release and plant uptake, are essential to understand the response of carbon (C) cycling to global changes. However, these processes are poorly represented in the current terrestrial biosphere models owing to the simple first-order approach of SOM cycling and the ignorance of variations within a soil profile. While the emerging microbially explicit soil organic C models can better describe C formation and turnover, at present, they lack a full coupling to the nitrogen (N) and phosphorus (P) cycles with the soil profile. Here we present a new SOM model – the Jena Soil Model (JSM) – which is... (More)
Plant–soil interactions, such as the coupling of plants' below-ground biomass allocation with soil organic matter (SOM) decomposition, nutrient release and plant uptake, are essential to understand the response of carbon (C) cycling to global changes. However, these processes are poorly represented in the current terrestrial biosphere models owing to the simple first-order approach of SOM cycling and the ignorance of variations within a soil profile. While the emerging microbially explicit soil organic C models can better describe C formation and turnover, at present, they lack a full coupling to the nitrogen (N) and phosphorus (P) cycles with the soil profile. Here we present a new SOM model – the Jena Soil Model (JSM) – which is microbially explicit, vertically resolved and integrated with the N and P cycles. To account for the effects of nutrient availability and litter quality on decomposition, JSM includes the representation of enzyme allocation to different depolymerisation sources based on the microbial adaptation approach as well as of nutrient acquisition competition based on the equilibrium chemistry approximation approach. Herein, we present the model structure and basic features of model performance in a beech forest in Germany. The model reproduced the main SOM stocks and microbial biomass as well as their vertical patterns in the soil profile. We further tested the sensitivity of the model to parameterisation and showed that JSM is generally sensitive to changes in microbial stoichiometry and processes. (Less)
Please use this url to cite or link to this publication:
author
; ; ; and
publishing date
type
Contribution to journal
publication status
published
in
Geoscientific Model Development
volume
13
issue
2
pages
783 - 803
publisher
Copernicus GmbH
external identifiers
  • scopus:85080891655
ISSN
1991-9603
DOI
10.5194/gmd-13-783-2020
language
English
LU publication?
no
id
814f2eeb-8de9-4690-9159-e9ca19ba1bb3
date added to LUP
2020-09-07 15:39:14
date last changed
2022-04-19 00:34:08
@article{814f2eeb-8de9-4690-9159-e9ca19ba1bb3,
  abstract     = {{Plant–soil interactions, such as the coupling of plants' below-ground biomass allocation with soil organic matter (SOM) decomposition, nutrient release and plant uptake, are essential to understand the response of carbon (C) cycling to global changes. However, these processes are poorly represented in the current terrestrial biosphere models owing to the simple first-order approach of SOM cycling and the ignorance of variations within a soil profile. While the emerging microbially explicit soil organic C models can better describe C formation and turnover, at present, they lack a full coupling to the nitrogen (N) and phosphorus (P) cycles with the soil profile. Here we present a new SOM model – the Jena Soil Model (JSM) – which is microbially explicit, vertically resolved and integrated with the N and P cycles. To account for the effects of nutrient availability and litter quality on decomposition, JSM includes the representation of enzyme allocation to different depolymerisation sources based on the microbial adaptation approach as well as of nutrient acquisition competition based on the equilibrium chemistry approximation approach. Herein, we present the model structure and basic features of model performance in a beech forest in Germany. The model reproduced the main SOM stocks and microbial biomass as well as their vertical patterns in the soil profile. We further tested the sensitivity of the model to parameterisation and showed that JSM is generally sensitive to changes in microbial stoichiometry and processes.}},
  author       = {{Yu, Lin and Ahrens, Bernhard and Wutzler, Thomas and Schrumpf, Marion and Zaehle, Sönke}},
  issn         = {{1991-9603}},
  language     = {{eng}},
  month        = {{02}},
  number       = {{2}},
  pages        = {{783--803}},
  publisher    = {{Copernicus GmbH}},
  series       = {{Geoscientific Model Development}},
  title        = {{Jena Soil Model (JSM v1.0; revision 1934): a microbial soil organic carbon model integrated with nitrogen and phosphorus processes}},
  url          = {{http://dx.doi.org/10.5194/gmd-13-783-2020}},
  doi          = {{10.5194/gmd-13-783-2020}},
  volume       = {{13}},
  year         = {{2020}},
}