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Identification of the ACTB p.Ser348Leu de novo variant in individuals with syndromic neonatal diabetes

Ahmed, Suhel ; Lewis, Victoria ; Russ-Silsby, James ; Wakeling, Matthew N. ; Thunander, Maria LU ; Vivanco, Maritza ; Caswell, Richard ; Hattersley, Andrew T. ; Bowman, Pamela and Patel, Kashyap , et al. (2026) In EBioMedicine 128.
Abstract

Background: Identifying novel genetic causes of diabetes in the first 6 months of life (neonatal diabetes) can highlight genes and pathways essential for pancreatic beta-cell development and function in humans. Our aim was to uncover genetic aetiologies of neonatal diabetes. Methods: We performed genome sequencing in 38 probands diagnosed with neonatal diabetes without an identified genetic cause, and their unaffected parents. Genes with de novo coding variants in ≥2 probands were followed up. Replication was performed in a separate cohort of 288 genetically unresolved individuals diagnosed with neonatal diabetes. Findings: The de novo ACTB (p.Ser348Leu) variant was identified in two unrelated individuals. Both had diabetes onset soon... (More)

Background: Identifying novel genetic causes of diabetes in the first 6 months of life (neonatal diabetes) can highlight genes and pathways essential for pancreatic beta-cell development and function in humans. Our aim was to uncover genetic aetiologies of neonatal diabetes. Methods: We performed genome sequencing in 38 probands diagnosed with neonatal diabetes without an identified genetic cause, and their unaffected parents. Genes with de novo coding variants in ≥2 probands were followed up. Replication was performed in a separate cohort of 288 genetically unresolved individuals diagnosed with neonatal diabetes. Findings: The de novo ACTB (p.Ser348Leu) variant was identified in two unrelated individuals. Both had diabetes onset soon after birth (1 and 8 days), low birthweight (−3.22SD and −3.98SD), and extra-pancreatic features (hearing loss and developmental delay in one; intestinal atresia in the other). The same ACTB (p.Ser348Leu) variant was reported in seven individuals in the literature; one individual had confirmed neonatal diabetes and a further two had hyperglycaemia. Extra-pancreatic features were similar to our probands (hearing loss in 3/7; neurodevelopmental features in 4/7; gastrointestinal atresia in 6/7). In total, 5/9 individuals with the ACTB (p.Ser348Leu) variant had neonatal diabetes or hyperglycaemia. None of the 96 cases with other ACTB pathogenic variants in the Human Gene Mutation Database had diabetes. Interpretation: The identification of 3 individuals (two in this report and one from the literature) with neonatal diabetes and a de novo ACTB p.(Ser348Leu) variant supports ACTB as a previously unrecognised neonatal diabetes aetiological gene, most likely through a variant-specific mechanism. Funding: Diabetes UK; EFSD/NNF; NIHR, Wellcome Trust.

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organization
publishing date
type
Contribution to journal
publication status
published
subject
keywords
ACTB, Beta-actin, Genome sequencing, Neonatal diabetes
in
EBioMedicine
volume
128
article number
106286
publisher
Elsevier
external identifiers
  • scopus:105038248980
  • pmid:42107907
ISSN
2352-3964
DOI
10.1016/j.ebiom.2026.106286
language
English
LU publication?
yes
id
c2437693-bcd8-4f73-b71e-d2b9163d6a9c
date added to LUP
2026-08-12 11:41:06
date last changed
2026-08-26 12:39:05
@article{c2437693-bcd8-4f73-b71e-d2b9163d6a9c,
  abstract     = {{<p>Background: Identifying novel genetic causes of diabetes in the first 6 months of life (neonatal diabetes) can highlight genes and pathways essential for pancreatic beta-cell development and function in humans. Our aim was to uncover genetic aetiologies of neonatal diabetes. Methods: We performed genome sequencing in 38 probands diagnosed with neonatal diabetes without an identified genetic cause, and their unaffected parents. Genes with de novo coding variants in ≥2 probands were followed up. Replication was performed in a separate cohort of 288 genetically unresolved individuals diagnosed with neonatal diabetes. Findings: The de novo ACTB (p.Ser348Leu) variant was identified in two unrelated individuals. Both had diabetes onset soon after birth (1 and 8 days), low birthweight (−3.22SD and −3.98SD), and extra-pancreatic features (hearing loss and developmental delay in one; intestinal atresia in the other). The same ACTB (p.Ser348Leu) variant was reported in seven individuals in the literature; one individual had confirmed neonatal diabetes and a further two had hyperglycaemia. Extra-pancreatic features were similar to our probands (hearing loss in 3/7; neurodevelopmental features in 4/7; gastrointestinal atresia in 6/7). In total, 5/9 individuals with the ACTB (p.Ser348Leu) variant had neonatal diabetes or hyperglycaemia. None of the 96 cases with other ACTB pathogenic variants in the Human Gene Mutation Database had diabetes. Interpretation: The identification of 3 individuals (two in this report and one from the literature) with neonatal diabetes and a de novo ACTB p.(Ser348Leu) variant supports ACTB as a previously unrecognised neonatal diabetes aetiological gene, most likely through a variant-specific mechanism. Funding: Diabetes UK; EFSD/NNF; NIHR, Wellcome Trust.</p>}},
  author       = {{Ahmed, Suhel and Lewis, Victoria and Russ-Silsby, James and Wakeling, Matthew N. and Thunander, Maria and Vivanco, Maritza and Caswell, Richard and Hattersley, Andrew T. and Bowman, Pamela and Patel, Kashyap and Flanagan, Sarah E. and De Franco, Elisa}},
  issn         = {{2352-3964}},
  keywords     = {{ACTB; Beta-actin; Genome sequencing; Neonatal diabetes}},
  language     = {{eng}},
  publisher    = {{Elsevier}},
  series       = {{EBioMedicine}},
  title        = {{Identification of the ACTB p.Ser348Leu de novo variant in individuals with syndromic neonatal diabetes}},
  url          = {{http://dx.doi.org/10.1016/j.ebiom.2026.106286}},
  doi          = {{10.1016/j.ebiom.2026.106286}},
  volume       = {{128}},
  year         = {{2026}},
}