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Uncovering human METTL12 as a mitochondrial methyltransferase that modulates citrate synthase activity through metabolite-sensitive lysine methylation

Małecki, Jędrzej ; Jakobsson, Magnus E LU ; Ho, Angela Y Y ; Moen, Anders ; Rustan, Arild C and Falnes, Pål Ø (2017) In Journal of Biological Chemistry 292(43). p.17950-17962
Abstract

Lysine methylation is an important and much-studied posttranslational modification of nuclear and cytosolic proteins but is present also in mitochondria. However, the responsible mitochondrial lysine-specific methyltransferases (KMTs) remain largely elusive. Here, we investigated METTL12, a mitochondrial human S-adenosylmethionine (AdoMet)-dependent methyltransferase and found it to methylate a single protein in mitochondrial extracts, identified as citrate synthase (CS). Using several in vitro and in vivo approaches, we demonstrated that METTL12 methylates CS on Lys-395, which is localized in the CS active site. Interestingly, the METTL12-mediated methylation inhibited CS activity and was blocked by the CS substrate oxaloacetate.... (More)

Lysine methylation is an important and much-studied posttranslational modification of nuclear and cytosolic proteins but is present also in mitochondria. However, the responsible mitochondrial lysine-specific methyltransferases (KMTs) remain largely elusive. Here, we investigated METTL12, a mitochondrial human S-adenosylmethionine (AdoMet)-dependent methyltransferase and found it to methylate a single protein in mitochondrial extracts, identified as citrate synthase (CS). Using several in vitro and in vivo approaches, we demonstrated that METTL12 methylates CS on Lys-395, which is localized in the CS active site. Interestingly, the METTL12-mediated methylation inhibited CS activity and was blocked by the CS substrate oxaloacetate. Moreover, METTL12 was strongly inhibited by the reaction product S-adenosylhomocysteine (AdoHcy). In summary, we have uncovered a novel human mitochondrial KMT that introduces a methyl modification into a metabolic enzyme and whose activity can be modulated by metabolic cues. Based on the established naming nomenclature for similar enzymes, we suggest that METTL12 be renamed CS-KMT (gene name CSKMT).

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author
; ; ; ; and
publishing date
type
Contribution to journal
publication status
published
subject
keywords
Citrate (si)-Synthase/genetics, HeLa Cells, Humans, Methylation, Methyltransferases/classification, Mitochondrial Proteins/classification, Oxaloacetic Acid/metabolism, S-Adenosylhomocysteine/metabolism
in
Journal of Biological Chemistry
volume
292
issue
43
pages
13 pages
publisher
American Society for Biochemistry and Molecular Biology
external identifiers
  • pmid:28887308
  • scopus:85032497171
ISSN
1083-351X
DOI
10.1074/jbc.M117.808451
language
English
LU publication?
no
additional info
© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.
id
cc5cff6f-3f09-4be4-b8f1-fa57e13ba208
date added to LUP
2020-01-13 08:52:54
date last changed
2024-05-29 07:07:22
@article{cc5cff6f-3f09-4be4-b8f1-fa57e13ba208,
  abstract     = {{<p>Lysine methylation is an important and much-studied posttranslational modification of nuclear and cytosolic proteins but is present also in mitochondria. However, the responsible mitochondrial lysine-specific methyltransferases (KMTs) remain largely elusive. Here, we investigated METTL12, a mitochondrial human S-adenosylmethionine (AdoMet)-dependent methyltransferase and found it to methylate a single protein in mitochondrial extracts, identified as citrate synthase (CS). Using several in vitro and in vivo approaches, we demonstrated that METTL12 methylates CS on Lys-395, which is localized in the CS active site. Interestingly, the METTL12-mediated methylation inhibited CS activity and was blocked by the CS substrate oxaloacetate. Moreover, METTL12 was strongly inhibited by the reaction product S-adenosylhomocysteine (AdoHcy). In summary, we have uncovered a novel human mitochondrial KMT that introduces a methyl modification into a metabolic enzyme and whose activity can be modulated by metabolic cues. Based on the established naming nomenclature for similar enzymes, we suggest that METTL12 be renamed CS-KMT (gene name CSKMT).</p>}},
  author       = {{Małecki, Jędrzej and Jakobsson, Magnus E and Ho, Angela Y Y and Moen, Anders and Rustan, Arild C and Falnes, Pål Ø}},
  issn         = {{1083-351X}},
  keywords     = {{Citrate (si)-Synthase/genetics; HeLa Cells; Humans; Methylation; Methyltransferases/classification; Mitochondrial Proteins/classification; Oxaloacetic Acid/metabolism; S-Adenosylhomocysteine/metabolism}},
  language     = {{eng}},
  month        = {{10}},
  number       = {{43}},
  pages        = {{17950--17962}},
  publisher    = {{American Society for Biochemistry and Molecular Biology}},
  series       = {{Journal of Biological Chemistry}},
  title        = {{Uncovering human METTL12 as a mitochondrial methyltransferase that modulates citrate synthase activity through metabolite-sensitive lysine methylation}},
  url          = {{http://dx.doi.org/10.1074/jbc.M117.808451}},
  doi          = {{10.1074/jbc.M117.808451}},
  volume       = {{292}},
  year         = {{2017}},
}