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Comparing minimum number of individuals and abundance from non-invasive DNA sampling and camera trapping in the red fox (Vulpes vulpes)

Martin-Garcia, Sara ; Cortazar-Chinarro, Maria LU ; Rodríguez-Recio, Mariano ; Jiménez, José ; Höglund, Jacob and Virgós, Emilio (2023) In Biodiversity and Conservation 32(6). p.1977-1998
Abstract

Applying the most appropriate sampling method is essential for estimating population size. Sampling methods and techniques to estimate abundance may be limited by environmental characteristics, species traits, specific requirements of the techniques, or the economic resources to carry out the sampling. Thus, evaluating multiple sampling methods in monitoring populations is essential for establishing effective conservation strategies. In this study, we compare two of the most commonly used sampling methods with the red fox (Vulpes vulpes) as the type species. On the one hand, we compared the minimum number of individuals (NI) detected by camera trapping, identifying individuals by morphological characteristics with the minimum number of... (More)

Applying the most appropriate sampling method is essential for estimating population size. Sampling methods and techniques to estimate abundance may be limited by environmental characteristics, species traits, specific requirements of the techniques, or the economic resources to carry out the sampling. Thus, evaluating multiple sampling methods in monitoring populations is essential for establishing effective conservation strategies. In this study, we compare two of the most commonly used sampling methods with the red fox (Vulpes vulpes) as the type species. On the one hand, we compared the minimum number of individuals (NI) detected by camera trapping, identifying individuals by morphological characteristics with the minimum number of individuals detected by DNA faeces and a set of 16 microsatellites. On the other hand, we estimated abundance by performing an N-mixture model using information from camera-traps to study the relationship between abundance and the minimum number of individuals detected. Results showed that the minimum NI provided by camera trapping was slightly higher than that of DNA faecal genotyping, with 23.66 and 19 individuals, respectively. In addition, abundance and NI detected by camera trapping showed a positive relationship. In contrast, there was a non-significant negative relationship between NI detected by faecal DNA and abundance estimates. Our results suggest using the minimum number of photo-identified individuals as a reliable index to study variation in red fox abundance when other advanced methods cannot be implemented in the study of population size. However, it is necessary to improve the methods of faecal sampling to study the relationship with camera-trap data.

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author
; ; ; ; and
organization
publishing date
type
Contribution to journal
publication status
published
subject
keywords
Camera-trap, Carnivore, Microsatellites, Molecular census, Monitoring, Survey methods
in
Biodiversity and Conservation
volume
32
issue
6
pages
22 pages
publisher
Springer
external identifiers
  • scopus:85151981140
ISSN
0960-3115
DOI
10.1007/s10531-023-02586-y
language
English
LU publication?
yes
id
f1bed7e3-879f-4b88-bea3-8c88a4e48b2d
date added to LUP
2023-07-12 15:55:41
date last changed
2023-07-12 15:55:41
@article{f1bed7e3-879f-4b88-bea3-8c88a4e48b2d,
  abstract     = {{<p>Applying the most appropriate sampling method is essential for estimating population size. Sampling methods and techniques to estimate abundance may be limited by environmental characteristics, species traits, specific requirements of the techniques, or the economic resources to carry out the sampling. Thus, evaluating multiple sampling methods in monitoring populations is essential for establishing effective conservation strategies. In this study, we compare two of the most commonly used sampling methods with the red fox (Vulpes vulpes) as the type species. On the one hand, we compared the minimum number of individuals (NI) detected by camera trapping, identifying individuals by morphological characteristics with the minimum number of individuals detected by DNA faeces and a set of 16 microsatellites. On the other hand, we estimated abundance by performing an N-mixture model using information from camera-traps to study the relationship between abundance and the minimum number of individuals detected. Results showed that the minimum NI provided by camera trapping was slightly higher than that of DNA faecal genotyping, with 23.66 and 19 individuals, respectively. In addition, abundance and NI detected by camera trapping showed a positive relationship. In contrast, there was a non-significant negative relationship between NI detected by faecal DNA and abundance estimates. Our results suggest using the minimum number of photo-identified individuals as a reliable index to study variation in red fox abundance when other advanced methods cannot be implemented in the study of population size. However, it is necessary to improve the methods of faecal sampling to study the relationship with camera-trap data.</p>}},
  author       = {{Martin-Garcia, Sara and Cortazar-Chinarro, Maria and Rodríguez-Recio, Mariano and Jiménez, José and Höglund, Jacob and Virgós, Emilio}},
  issn         = {{0960-3115}},
  keywords     = {{Camera-trap; Carnivore; Microsatellites; Molecular census; Monitoring; Survey methods}},
  language     = {{eng}},
  number       = {{6}},
  pages        = {{1977--1998}},
  publisher    = {{Springer}},
  series       = {{Biodiversity and Conservation}},
  title        = {{Comparing minimum number of individuals and abundance from non-invasive DNA sampling and camera trapping in the red fox (Vulpes vulpes)}},
  url          = {{http://dx.doi.org/10.1007/s10531-023-02586-y}},
  doi          = {{10.1007/s10531-023-02586-y}},
  volume       = {{32}},
  year         = {{2023}},
}