Skip to main content

Lund University Publications

LUND UNIVERSITY LIBRARIES

BioID-Screening Identifies PEAK1 and SHP2 as Components of the ALK Proximitome in Neuroblastoma Cells

Uçkun, Ezgi ; Siaw, Joachim T. LU orcid ; Guan, Jikui ; Anthonydhason, Vimala ; Fuchs, Johannes ; Wolfstetter, Georg ; Hallberg, Bengt and Palmer, Ruth H. (2021) In Journal of Molecular Biology 433(19). p.1-20
Abstract

Anaplastic lymphoma kinase (ALK) is a receptor tyrosine kinase (RTK) that is mutated in approximately 10% of pediatric neuroblastoma (NB). To shed light on ALK-driven signaling processes, we employed BioID-based in vivo proximity labeling to identify molecules that interact intracellularly with ALK. NB-derived SK-N-AS and SK-N-BE(2) cells expressing inducible ALK-BirA* fusion proteins were generated and stimulated with ALKAL ligands in the presence and absence of the ALK tyrosine kinase inhibitor (TKI) lorlatinib. LC/MS-MS analysis identified multiple proteins, including PEAK1 and SHP2, which were validated as ALK interactors in NB cells. Further analysis of the ALK-SHP2 interaction confirmed that the ALK-SHP2 interaction as well as... (More)

Anaplastic lymphoma kinase (ALK) is a receptor tyrosine kinase (RTK) that is mutated in approximately 10% of pediatric neuroblastoma (NB). To shed light on ALK-driven signaling processes, we employed BioID-based in vivo proximity labeling to identify molecules that interact intracellularly with ALK. NB-derived SK-N-AS and SK-N-BE(2) cells expressing inducible ALK-BirA* fusion proteins were generated and stimulated with ALKAL ligands in the presence and absence of the ALK tyrosine kinase inhibitor (TKI) lorlatinib. LC/MS-MS analysis identified multiple proteins, including PEAK1 and SHP2, which were validated as ALK interactors in NB cells. Further analysis of the ALK-SHP2 interaction confirmed that the ALK-SHP2 interaction as well as SHP2-Y542 phosphorylation was dependent on ALK activation. Use of the SHP2 inhibitors, SHP099 and RMC-4550, resulted in inhibition of cell growth in ALK-driven NB cells. In addition, we noted a strong synergistic effect of combined ALK and SHP2 inhibition that was specific to ALK-driven NB cells, suggesting a potential therapeutic option for ALK-driven NB.

(Less)
Please use this url to cite or link to this publication:
author
; ; ; ; ; ; and
publishing date
type
Contribution to journal
publication status
published
keywords
BirA*, lorlatinib, RMC-4550, SHP099, signaling
in
Journal of Molecular Biology
volume
433
issue
19
article number
167158
pages
1 - 20
publisher
Elsevier
external identifiers
  • pmid:34273398
  • scopus:85111800755
ISSN
0022-2836
DOI
10.1016/j.jmb.2021.167158
language
English
LU publication?
no
additional info
Publisher Copyright: © 2021 The Author(s)
id
f1f08297-a825-4cee-ade9-9386979b403a
date added to LUP
2025-03-19 11:49:25
date last changed
2025-03-20 08:02:29
@article{f1f08297-a825-4cee-ade9-9386979b403a,
  abstract     = {{<p>Anaplastic lymphoma kinase (ALK) is a receptor tyrosine kinase (RTK) that is mutated in approximately 10% of pediatric neuroblastoma (NB). To shed light on ALK-driven signaling processes, we employed BioID-based in vivo proximity labeling to identify molecules that interact intracellularly with ALK. NB-derived SK-N-AS and SK-N-BE(2) cells expressing inducible ALK-BirA* fusion proteins were generated and stimulated with ALKAL ligands in the presence and absence of the ALK tyrosine kinase inhibitor (TKI) lorlatinib. LC/MS-MS analysis identified multiple proteins, including PEAK1 and SHP2, which were validated as ALK interactors in NB cells. Further analysis of the ALK-SHP2 interaction confirmed that the ALK-SHP2 interaction as well as SHP2-Y542 phosphorylation was dependent on ALK activation. Use of the SHP2 inhibitors, SHP099 and RMC-4550, resulted in inhibition of cell growth in ALK-driven NB cells. In addition, we noted a strong synergistic effect of combined ALK and SHP2 inhibition that was specific to ALK-driven NB cells, suggesting a potential therapeutic option for ALK-driven NB.</p>}},
  author       = {{Uçkun, Ezgi and Siaw, Joachim T. and Guan, Jikui and Anthonydhason, Vimala and Fuchs, Johannes and Wolfstetter, Georg and Hallberg, Bengt and Palmer, Ruth H.}},
  issn         = {{0022-2836}},
  keywords     = {{BirA*; lorlatinib; RMC-4550; SHP099; signaling}},
  language     = {{eng}},
  month        = {{09}},
  number       = {{19}},
  pages        = {{1--20}},
  publisher    = {{Elsevier}},
  series       = {{Journal of Molecular Biology}},
  title        = {{BioID-Screening Identifies PEAK1 and SHP2 as Components of the ALK Proximitome in Neuroblastoma Cells}},
  url          = {{http://dx.doi.org/10.1016/j.jmb.2021.167158}},
  doi          = {{10.1016/j.jmb.2021.167158}},
  volume       = {{433}},
  year         = {{2021}},
}