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- 2023
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Mark
uORF4u : a tool for annotation of conserved upstream open reading frames
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- Contribution to journal › Article
- 2022
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Mark
Analysing high-throughput sequencing data in Python with HTSeq 2.0
(
- Contribution to journal › Article
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Mark
A comparison of rule-based and centroid single-sample multiclass predictors for transcriptomic classification
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- Contribution to journal › Article
- 2021
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Mark
BigDataProcessor2 : A free and open-source Fiji plugin for inspection and processing of TB sized image data
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- Contribution to journal › Article
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Mark
multiclassPairs: An R package to train multiclass pair-based classifier
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- Contribution to journal › Debate/Note/Editorial
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Mark
Cheetah-MS: a web server to model protein complexes using tandem cross-linking mass spectrometry data
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- Contribution to journal › Article
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Mark
FlaGs and webFlaGs : discovering novel biology through the analysis of gene neighbourhood conservation
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- Contribution to journal › Article
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Mark
ZEAL : protein structure alignment based on shape similarity
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- Contribution to journal › Article
- 2020
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Mark
Benchmarking immunoinformatic tools for the analysis of antibody repertoire sequences
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- Contribution to journal › Article
- 2019
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Mark
SMSSVD : SubMatrix Selection Singular Value Decomposition
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- Contribution to journal › Article
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Mark
Uncertainty quantification, propagation and characterization by Bayesian analysis combined with global sensitivity analysis applied to dynamical intracellular pathway models
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- Contribution to journal › Article
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Mark
RTNduals an R/Bioconductor package for analysis of co-regulation and inference of dual regulons
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- Contribution to journal › Letter
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Mark
MPRAscore : robust and non-parametric analysis of massively parallel reporter assays
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- Contribution to journal › Article
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Mark
Pair Matcher (PaM) : fast model-based optimization of treatment/case-control matches
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- Contribution to journal › Article
- 2018
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Mark
Using standard microbiome reference groups to simplify beta-diversity analyses and facilitate independent validation
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- Contribution to journal › Article
- 2017
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Mark
LoFtool : a gene intolerance score based on loss-of-function variants in 60 706 individuals
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- Contribution to journal › Article
- 2016
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Mark
PON-Sol : Prediction of effects of amino acid substitutions on protein solubility
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- Contribution to journal › Article
- 2015
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Mark
DIANA - algorithmic improvements for analysis of data-independent acquisition MS data.
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- Contribution to journal › Article
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Mark
NBSPred: A support vector machine-based high throughput pipeline for plant resistance protein NBSLRR prediction.
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- Contribution to journal › Article
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Mark
Automatic determination of NET (neutrophil extracellular traps) coverage in fluorescent microscopy images
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- Contribution to journal › Article