Testing morphology-based delimitation of Vulpicida juniperinus and V. tubulosus (Parmeliaceae) using three molecular markers.
(2012) In Lichenologist 44(6). p.757-772- Abstract
- The delimitation of two morphologically similar and not easily separable Vulpicida species,V. juniperinus and V. tubulosus, is analyzed using nuclear ITS and Mcm7, and mitochondrial SSU DNA sequences. Seventy-nine Vulpicida specimens, most from the two focal taxa, are included in the three-locus gene tree. The results from Bayesian and parsimony analyses are presented. There are strong conflicts between the single locus gene trees. Vulpicida juniperinus and V. tubulosus are divided into two clearly distinguished groups in the ITS and concatenated B/MCMC tree. However, these species are mixed in both clades, appearing polyphyletic. Currently accepted V. juniperinus and V. tubulosus are not distinct according to the loci studied. Vulpicida... (More)
- The delimitation of two morphologically similar and not easily separable Vulpicida species,V. juniperinus and V. tubulosus, is analyzed using nuclear ITS and Mcm7, and mitochondrial SSU DNA sequences. Seventy-nine Vulpicida specimens, most from the two focal taxa, are included in the three-locus gene tree. The results from Bayesian and parsimony analyses are presented. There are strong conflicts between the single locus gene trees. Vulpicida juniperinus and V. tubulosus are divided into two clearly distinguished groups in the ITS and concatenated B/MCMC tree. However, these species are mixed in both clades, appearing polyphyletic. Currently accepted V. juniperinus and V. tubulosus are not distinct according to the loci studied. Vulpicida pinastri appears monophyletic based on the available sequences. (Less)
Please use this url to cite or link to this publication:
https://lup.lub.lu.se/record/3125950
- author
- Mark, Kristiina ; Saag, Lauri ; Saag, Andres ; Thell, Arne LU and Randlane, Tiina
- organization
- publishing date
- 2012
- type
- Contribution to journal
- publication status
- published
- subject
- keywords
- molecular phylogenetics, Mcm7, ITS, lichenized fungi, gene tree, MrBayes, mtSSU
- in
- Lichenologist
- volume
- 44
- issue
- 6
- pages
- 757 - 772
- publisher
- Cambridge University Press
- external identifiers
-
- wos:000309730900004
- scopus:84867383301
- ISSN
- 0024-2829
- DOI
- 10.1017/S0024282912000448
- language
- English
- LU publication?
- yes
- id
- 59f5e2f8-9f90-461d-bb01-d0fea61a0442 (old id 3125950)
- date added to LUP
- 2016-04-01 13:16:10
- date last changed
- 2024-01-09 11:05:34
@article{59f5e2f8-9f90-461d-bb01-d0fea61a0442, abstract = {{The delimitation of two morphologically similar and not easily separable Vulpicida species,V. juniperinus and V. tubulosus, is analyzed using nuclear ITS and Mcm7, and mitochondrial SSU DNA sequences. Seventy-nine Vulpicida specimens, most from the two focal taxa, are included in the three-locus gene tree. The results from Bayesian and parsimony analyses are presented. There are strong conflicts between the single locus gene trees. Vulpicida juniperinus and V. tubulosus are divided into two clearly distinguished groups in the ITS and concatenated B/MCMC tree. However, these species are mixed in both clades, appearing polyphyletic. Currently accepted V. juniperinus and V. tubulosus are not distinct according to the loci studied. Vulpicida pinastri appears monophyletic based on the available sequences.}}, author = {{Mark, Kristiina and Saag, Lauri and Saag, Andres and Thell, Arne and Randlane, Tiina}}, issn = {{0024-2829}}, keywords = {{molecular phylogenetics; Mcm7; ITS; lichenized fungi; gene tree; MrBayes; mtSSU}}, language = {{eng}}, number = {{6}}, pages = {{757--772}}, publisher = {{Cambridge University Press}}, series = {{Lichenologist}}, title = {{Testing morphology-based delimitation of Vulpicida juniperinus and V. tubulosus (Parmeliaceae) using three molecular markers.}}, url = {{http://dx.doi.org/10.1017/S0024282912000448}}, doi = {{10.1017/S0024282912000448}}, volume = {{44}}, year = {{2012}}, }