HemaExplorer: a database of mRNA expression profiles in normal and malignant haematopoiesis.
(2013) In Nucleic Acids Research 41(D1). p.1034-1039- Abstract
- The HemaExplorer (http://servers.binf.ku.dk/hemaexplorer) is a curated database of processed mRNA Gene expression profiles (GEPs) that provides an easy display of gene expression in haematopoietic cells. HemaExplorer contains GEPs derived from mouse/human haematopoietic stem and progenitor cells as well as from more differentiated cell types. Moreover, data from distinct subtypes of human acute myeloid leukemia is included in the database allowing researchers to directly compare gene expression of leukemic cells with those of their closest normal counterpart. Normalization and batch correction lead to full integrity of the data in the database. The HemaExplorer has comprehensive visualization interface that can make it useful as a daily... (More)
- The HemaExplorer (http://servers.binf.ku.dk/hemaexplorer) is a curated database of processed mRNA Gene expression profiles (GEPs) that provides an easy display of gene expression in haematopoietic cells. HemaExplorer contains GEPs derived from mouse/human haematopoietic stem and progenitor cells as well as from more differentiated cell types. Moreover, data from distinct subtypes of human acute myeloid leukemia is included in the database allowing researchers to directly compare gene expression of leukemic cells with those of their closest normal counterpart. Normalization and batch correction lead to full integrity of the data in the database. The HemaExplorer has comprehensive visualization interface that can make it useful as a daily tool for biologists and cancer researchers to assess the expression patterns of genes encountered in research or literature. HemaExplorer is relevant for all research within the fields of leukemia, immunology, cell differentiation and the biology of the haematopoietic system. (Less)
Please use this url to cite or link to this publication:
https://lup.lub.lu.se/record/3219031
- author
- Bagger, Frederik Otzen ; Rapin, Nicolas LU ; Theilgaard-Moench, Kim LU ; Kaczkowski, Bogumil ; Thorén, Lina LU ; Jendholm, Johan LU ; Winther, Ole and Porse, Bo T
- organization
- publishing date
- 2013
- type
- Contribution to journal
- publication status
- published
- subject
- in
- Nucleic Acids Research
- volume
- 41
- issue
- D1
- pages
- 1034 - 1039
- publisher
- Oxford University Press
- external identifiers
-
- wos:000312893300147
- pmid:23143109
- scopus:84876569352
- pmid:23143109
- ISSN
- 1362-4962
- DOI
- 10.1093/nar/gks1021
- language
- English
- LU publication?
- yes
- id
- 84128b36-5544-42a0-8270-9e94ec70bb84 (old id 3219031)
- alternative location
- http://www.ncbi.nlm.nih.gov/pubmed/23143109?dopt=Abstract
- date added to LUP
- 2016-04-01 10:10:50
- date last changed
- 2022-06-08 04:47:29
@article{84128b36-5544-42a0-8270-9e94ec70bb84, abstract = {{The HemaExplorer (http://servers.binf.ku.dk/hemaexplorer) is a curated database of processed mRNA Gene expression profiles (GEPs) that provides an easy display of gene expression in haematopoietic cells. HemaExplorer contains GEPs derived from mouse/human haematopoietic stem and progenitor cells as well as from more differentiated cell types. Moreover, data from distinct subtypes of human acute myeloid leukemia is included in the database allowing researchers to directly compare gene expression of leukemic cells with those of their closest normal counterpart. Normalization and batch correction lead to full integrity of the data in the database. The HemaExplorer has comprehensive visualization interface that can make it useful as a daily tool for biologists and cancer researchers to assess the expression patterns of genes encountered in research or literature. HemaExplorer is relevant for all research within the fields of leukemia, immunology, cell differentiation and the biology of the haematopoietic system.}}, author = {{Bagger, Frederik Otzen and Rapin, Nicolas and Theilgaard-Moench, Kim and Kaczkowski, Bogumil and Thorén, Lina and Jendholm, Johan and Winther, Ole and Porse, Bo T}}, issn = {{1362-4962}}, language = {{eng}}, number = {{D1}}, pages = {{1034--1039}}, publisher = {{Oxford University Press}}, series = {{Nucleic Acids Research}}, title = {{HemaExplorer: a database of mRNA expression profiles in normal and malignant haematopoiesis.}}, url = {{https://lup.lub.lu.se/search/files/1628781/3736772.pdf}}, doi = {{10.1093/nar/gks1021}}, volume = {{41}}, year = {{2013}}, }