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Generation of neutralizing antibodies and divergence of SIVmac239 in cynomolgus macaques following short-term early antiretroviral therapy.

Özkaya Sahin, Gülsen LU ; Bowles, Emma J ; Parker, Joe ; Uchtenhagen, Hannes ; Sheik-Khalil, Enas LU ; Taylor, Stephen ; Pybus, Oliver G ; Mäkitalo, Barbro ; Walther-Jallow, Lilian and Spångberg, Mats , et al. (2010) In PLoS Pathogens 6(9).
Abstract
Neutralizing antibodies (NAb) able to react to heterologous viruses are generated during natural HIV-1 infection in some individuals. Further knowledge is required in order to understand the factors contributing to induction of cross-reactive NAb responses. Here a well-established model of experimental pathogenic infection in cynomolgus macaques, which reproduces long-lasting HIV-1 infection, was used to study the NAb response as well as the viral evolution of the highly neutralization-resistant SIVmac239. Twelve animals were infected intravenously with SIVmac239. Antiretroviral therapy (ART) was initiated ten days post-inoculation and administered daily for four months. Viral load, CD4(+) T-cell counts, total IgG levels, and breadth as... (More)
Neutralizing antibodies (NAb) able to react to heterologous viruses are generated during natural HIV-1 infection in some individuals. Further knowledge is required in order to understand the factors contributing to induction of cross-reactive NAb responses. Here a well-established model of experimental pathogenic infection in cynomolgus macaques, which reproduces long-lasting HIV-1 infection, was used to study the NAb response as well as the viral evolution of the highly neutralization-resistant SIVmac239. Twelve animals were infected intravenously with SIVmac239. Antiretroviral therapy (ART) was initiated ten days post-inoculation and administered daily for four months. Viral load, CD4(+) T-cell counts, total IgG levels, and breadth as well as strength of NAb in plasma were compared simultaneously over 14 months. In addition, envs from plasma samples were sequenced at three time points in all animals in order to assess viral evolution. We report here that seven of the 12 animals controlled viremia to below 10(4) copies/ml of plasma after discontinuation of ART and that this control was associated with a low level of evolutionary divergence. Macaques that controlled viral load developed broader NAb responses early on. Furthermore, escape mutations, such as V67M and R751G, were identified in virus sequenced from all animals with uncontrolled viremia. Bayesian estimation of ancestral population genetic diversity (PGD) showed an increase in this value in non-controlling or transient-controlling animals during the first 5.5 months of infection, in contrast to virus-controlling animals. Similarly, non- or transient controllers displayed more positively-selected amino-acid substitutions. An early increase in PGD, resulting in the generation of positively-selected amino-acid substitutions, greater divergence and relative high viral load after ART withdrawal, may have contributed to the generation of potent NAb in several animals after SIVmac239 infection. However, early broad NAb responses correlated with relatively preserved CD4(+) T-cell numbers, low viral load and limited viral divergence. (Less)
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organization
publishing date
type
Contribution to journal
publication status
published
subject
in
PLoS Pathogens
volume
6
issue
9
article number
e1001084
publisher
Public Library of Science (PLoS)
external identifiers
  • wos:000282373000048
  • pmid:20824092
  • scopus:78149326494
  • pmid:20824092
ISSN
1553-7366
DOI
10.1371/journal.ppat.1001084
language
English
LU publication?
yes
id
9391f106-4a0e-45f7-8782-3e3ac4399143 (old id 1688457)
alternative location
http://www.ncbi.nlm.nih.gov/pubmed/20824092?dopt=Abstract
date added to LUP
2016-04-04 07:38:48
date last changed
2022-01-29 02:27:24
@article{9391f106-4a0e-45f7-8782-3e3ac4399143,
  abstract     = {{Neutralizing antibodies (NAb) able to react to heterologous viruses are generated during natural HIV-1 infection in some individuals. Further knowledge is required in order to understand the factors contributing to induction of cross-reactive NAb responses. Here a well-established model of experimental pathogenic infection in cynomolgus macaques, which reproduces long-lasting HIV-1 infection, was used to study the NAb response as well as the viral evolution of the highly neutralization-resistant SIVmac239. Twelve animals were infected intravenously with SIVmac239. Antiretroviral therapy (ART) was initiated ten days post-inoculation and administered daily for four months. Viral load, CD4(+) T-cell counts, total IgG levels, and breadth as well as strength of NAb in plasma were compared simultaneously over 14 months. In addition, envs from plasma samples were sequenced at three time points in all animals in order to assess viral evolution. We report here that seven of the 12 animals controlled viremia to below 10(4) copies/ml of plasma after discontinuation of ART and that this control was associated with a low level of evolutionary divergence. Macaques that controlled viral load developed broader NAb responses early on. Furthermore, escape mutations, such as V67M and R751G, were identified in virus sequenced from all animals with uncontrolled viremia. Bayesian estimation of ancestral population genetic diversity (PGD) showed an increase in this value in non-controlling or transient-controlling animals during the first 5.5 months of infection, in contrast to virus-controlling animals. Similarly, non- or transient controllers displayed more positively-selected amino-acid substitutions. An early increase in PGD, resulting in the generation of positively-selected amino-acid substitutions, greater divergence and relative high viral load after ART withdrawal, may have contributed to the generation of potent NAb in several animals after SIVmac239 infection. However, early broad NAb responses correlated with relatively preserved CD4(+) T-cell numbers, low viral load and limited viral divergence.}},
  author       = {{Özkaya Sahin, Gülsen and Bowles, Emma J and Parker, Joe and Uchtenhagen, Hannes and Sheik-Khalil, Enas and Taylor, Stephen and Pybus, Oliver G and Mäkitalo, Barbro and Walther-Jallow, Lilian and Spångberg, Mats and Thorstensson, Rigmor and Achour, Adnane and Fenyö, Eva Maria and Stewart-Jones, Guillaume B E and Spetz, Anna-Lena}},
  issn         = {{1553-7366}},
  language     = {{eng}},
  number       = {{9}},
  publisher    = {{Public Library of Science (PLoS)}},
  series       = {{PLoS Pathogens}},
  title        = {{Generation of neutralizing antibodies and divergence of SIVmac239 in cynomolgus macaques following short-term early antiretroviral therapy.}},
  url          = {{https://lup.lub.lu.se/search/files/5147012/1692118.pdf}},
  doi          = {{10.1371/journal.ppat.1001084}},
  volume       = {{6}},
  year         = {{2010}},
}