An introduction to BioArray software environment
Troein, Carl LU
; Vallon-Christersson, Johan
LU
and Saal, Lao
LU
(2006)
In Methods in Enzymology
411.
p.99-119
- Abstract
- BioArray Software Environment (BASE) is a web-based software package for storing, searching, and analyzing locally generated microarray data and information surrounding microarray production. The workflow begins in sample management and, optionally, microtiter plate tracking and ends in visualization and analysis of entire experiments. The relative ease with which new analysis plug-ins can be added has given rise to a plethora of third-party tools, and the licensing terms (GNU GPL) encourage local modifications of the software. This introduction to BASE describes the basics of working with the software, both in general and in more detail for the various parts. It also provides some hints about more advanced usage and a section on what is... (More)
- BioArray Software Environment (BASE) is a web-based software package for storing, searching, and analyzing locally generated microarray data and information surrounding microarray production. The workflow begins in sample management and, optionally, microtiter plate tracking and ends in visualization and analysis of entire experiments. The relative ease with which new analysis plug-ins can be added has given rise to a plethora of third-party tools, and the licensing terms (GNU GPL) encourage local modifications of the software. This introduction to BASE describes the basics of working with the software, both in general and in more detail for the various parts. It also provides some hints about more advanced usage and a section on what is needed to set up your own BASE server. The information is current as of BASE version 1.2.17b, which was released on November 6, 2005. (Less)
Please use this url to cite or link to this publication:
https://lup.lub.lu.se/record/672817
- author
- Troein, Carl
LU
; Vallon-Christersson, Johan
LU
and Saal, Lao
LU
- organization
- publishing date
- 2006
- type
- Contribution to journal
- publication status
- published
- subject
- in
- Methods in Enzymology
- volume
- 411
- pages
- 99 - 119
- publisher
- Academic Press
- external identifiers
-
- wos:000244506300007
- scopus:33747894108
- ISSN
- 0076-6879
- DOI
- 10.1016/S0076-6879(06)11007-1
- language
- English
- LU publication?
- yes
- id
- 5719bcba-fc19-44c7-9254-086fc18cf831 (old id 672817)
- date added to LUP
- 2016-04-01 15:47:57
- date last changed
- 2022-12-12 06:14:53
@article{5719bcba-fc19-44c7-9254-086fc18cf831,
abstract = {{BioArray Software Environment (BASE) is a web-based software package for storing, searching, and analyzing locally generated microarray data and information surrounding microarray production. The workflow begins in sample management and, optionally, microtiter plate tracking and ends in visualization and analysis of entire experiments. The relative ease with which new analysis plug-ins can be added has given rise to a plethora of third-party tools, and the licensing terms (GNU GPL) encourage local modifications of the software. This introduction to BASE describes the basics of working with the software, both in general and in more detail for the various parts. It also provides some hints about more advanced usage and a section on what is needed to set up your own BASE server. The information is current as of BASE version 1.2.17b, which was released on November 6, 2005.}},
author = {{Troein, Carl and Vallon-Christersson, Johan and Saal, Lao}},
issn = {{0076-6879}},
language = {{eng}},
pages = {{99--119}},
publisher = {{Academic Press}},
series = {{Methods in Enzymology}},
title = {{An introduction to BioArray software environment}},
url = {{http://dx.doi.org/10.1016/S0076-6879(06)11007-1}},
doi = {{10.1016/S0076-6879(06)11007-1}},
volume = {{411}},
year = {{2006}},
}