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In silico design of a matrix (M) protein–based vaccine candidate against Newcastle disease virus

Kamran, Zainab ; Waseem, Maaz and Asghar, Muhammad LU orcid (2026) In Poultry Science 105(1).
Abstract

Poultry industry worldwide: Newcastle Disease (ND) is highly contagious poultry viral disease posed a major threat to the poultry industry due to millions of deaths worldwide. Newcastle Disease Virus (NDV) cause recurrent epidemics due to its rapid genomic evolution. In this study, we developed an in silico vaccine against all NDV strains using matrix protein. A reverse vaccinology approach was employed to develop the vaccine. B- and T- cell epitopes that were antigenic, virulent, non-allergenic and MHC alleles binders were selected and linked via linkers. To enhance the immunogenicity EAAAK adjuvant has been linked with N-terminal of the vaccine. The 3D structure of the vaccine was constructed, refined, and validated. The vaccine... (More)

Poultry industry worldwide: Newcastle Disease (ND) is highly contagious poultry viral disease posed a major threat to the poultry industry due to millions of deaths worldwide. Newcastle Disease Virus (NDV) cause recurrent epidemics due to its rapid genomic evolution. In this study, we developed an in silico vaccine against all NDV strains using matrix protein. A reverse vaccinology approach was employed to develop the vaccine. B- and T- cell epitopes that were antigenic, virulent, non-allergenic and MHC alleles binders were selected and linked via linkers. To enhance the immunogenicity EAAAK adjuvant has been linked with N-terminal of the vaccine. The 3D structure of the vaccine was constructed, refined, and validated. The vaccine showed high potential for immunogenicity, non-allergenicity, and antigenicity. Molecular docking confirmed strong binding to chicken Toll-like receptor-4 (TLR4), and subsequently, the in-silico immunological simulations depicted a robust and sustained immune response to the vaccine. Computational analyses suggested that the vaccine is physically stable and highly immunogenic, making it a promising candidate against NDV. This study highlights the efficacy of the vaccine design, offering a promising solution for NDV outbreaks in Pakistan and similar regions at the time of emerging infectious diseases.

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author
; and
organization
publishing date
type
Contribution to journal
publication status
published
subject
keywords
Computational analysis, In-silico vaccine, M-protein, Molecular docking, NDV
in
Poultry Science
volume
105
issue
1
article number
106101
publisher
Poultry Science Association
external identifiers
  • scopus:105021885166
  • pmid:41252860
ISSN
0032-5791
DOI
10.1016/j.psj.2025.106101
language
English
LU publication?
yes
id
ebb1ed28-ed6e-4b4c-89de-1a1d75732c0c
date added to LUP
2026-02-11 11:43:36
date last changed
2026-09-11 17:17:08
@article{ebb1ed28-ed6e-4b4c-89de-1a1d75732c0c,
  abstract     = {{<p>Poultry industry worldwide: Newcastle Disease (ND) is highly contagious poultry viral disease posed a major threat to the poultry industry due to millions of deaths worldwide. Newcastle Disease Virus (NDV) cause recurrent epidemics due to its rapid genomic evolution. In this study, we developed an in silico vaccine against all NDV strains using matrix protein. A reverse vaccinology approach was employed to develop the vaccine. B- and T- cell epitopes that were antigenic, virulent, non-allergenic and MHC alleles binders were selected and linked via linkers. To enhance the immunogenicity EAAAK adjuvant has been linked with N-terminal of the vaccine. The 3D structure of the vaccine was constructed, refined, and validated. The vaccine showed high potential for immunogenicity, non-allergenicity, and antigenicity. Molecular docking confirmed strong binding to chicken Toll-like receptor-4 (TLR4), and subsequently, the in-silico immunological simulations depicted a robust and sustained immune response to the vaccine. Computational analyses suggested that the vaccine is physically stable and highly immunogenic, making it a promising candidate against NDV. This study highlights the efficacy of the vaccine design, offering a promising solution for NDV outbreaks in Pakistan and similar regions at the time of emerging infectious diseases.</p>}},
  author       = {{Kamran, Zainab and Waseem, Maaz and Asghar, Muhammad}},
  issn         = {{0032-5791}},
  keywords     = {{Computational analysis; In-silico vaccine; M-protein; Molecular docking; NDV}},
  language     = {{eng}},
  number       = {{1}},
  publisher    = {{Poultry Science Association}},
  series       = {{Poultry Science}},
  title        = {{In silico design of a matrix (M) protein–based vaccine candidate against Newcastle disease virus}},
  url          = {{http://dx.doi.org/10.1016/j.psj.2025.106101}},
  doi          = {{10.1016/j.psj.2025.106101}},
  volume       = {{105}},
  year         = {{2026}},
}