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Draft genome of the oomycete pathogen Phytophthora cactorum strain LV007 isolated from European beech (Fagus sylvatica)

Grenville-Briggs, Laura J.; Kushwaha, Sandeep K. LU ; Cleary, Michelle R.; witzell, johanna; Savenkov, Eugene I.; Whisson, Stephen C.; Chawade, Aakash and Vetukuri, Ramesh R. (2017) In Genomics Data 12. p.155-156
Abstract

Phytophthora cactorum is a broad host range phytopathogenic oomycete. P. cactorum strain LV007 was isolated from a diseased European Beech (Fagus sylvatica) in Malmö, Sweden in 2016. The draft genome of P. cactorum strain LV007 is 67.81 Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.

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author
organization
publishing date
type
Contribution to journal
publication status
published
subject
in
Genomics Data
volume
12
pages
2 pages
publisher
Elsevier Inc.
external identifiers
  • scopus:85019215394
  • wos:000405736700040
ISSN
2213-5960
DOI
10.1016/j.gdata.2017.05.010
language
English
LU publication?
yes
id
49b6f198-8492-400f-8be6-a2d16fd0ccb6
date added to LUP
2017-05-29 14:15:19
date last changed
2017-09-18 11:37:57
@article{49b6f198-8492-400f-8be6-a2d16fd0ccb6,
  abstract     = {<p>Phytophthora cactorum is a broad host range phytopathogenic oomycete. P. cactorum strain LV007 was isolated from a diseased European Beech (Fagus sylvatica) in Malmö, Sweden in 2016. The draft genome of P. cactorum strain LV007 is 67.81 Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.</p>},
  author       = {Grenville-Briggs, Laura J. and Kushwaha, Sandeep K. and Cleary, Michelle R. and witzell, johanna and Savenkov, Eugene I. and Whisson, Stephen C. and Chawade, Aakash and Vetukuri, Ramesh R.},
  issn         = {2213-5960},
  language     = {eng},
  month        = {06},
  pages        = {155--156},
  publisher    = {Elsevier Inc.},
  series       = {Genomics Data},
  title        = {Draft genome of the oomycete pathogen Phytophthora cactorum strain LV007 isolated from European beech (Fagus sylvatica)},
  url          = {http://dx.doi.org/10.1016/j.gdata.2017.05.010},
  volume       = {12},
  year         = {2017},
}