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Draft genome of the oomycete pathogen Phytophthora cactorum strain LV007 isolated from European beech (Fagus sylvatica)

Grenville-Briggs, Laura J. ; Kushwaha, Sandeep K. LU ; Cleary, Michelle R. ; witzell, johanna ; Savenkov, Eugene I. ; Whisson, Stephen C. ; Chawade, Aakash and Vetukuri, Ramesh R. (2017) In Genomics Data 12. p.155-156
Abstract

Phytophthora cactorum is a broad host range phytopathogenic oomycete. P. cactorum strain LV007 was isolated from a diseased European Beech (Fagus sylvatica) in Malmö, Sweden in 2016. The draft genome of P. cactorum strain LV007 is 67.81 Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.

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author
; ; ; ; ; ; and
organization
publishing date
type
Contribution to journal
publication status
published
subject
in
Genomics Data
volume
12
pages
2 pages
publisher
Elsevier
external identifiers
  • scopus:85019215394
  • pmid:28560165
  • wos:000405736700040
ISSN
2213-5960
DOI
10.1016/j.gdata.2017.05.010
language
English
LU publication?
yes
id
49b6f198-8492-400f-8be6-a2d16fd0ccb6
date added to LUP
2017-05-29 14:15:19
date last changed
2025-01-07 14:23:16
@article{49b6f198-8492-400f-8be6-a2d16fd0ccb6,
  abstract     = {{<p>Phytophthora cactorum is a broad host range phytopathogenic oomycete. P. cactorum strain LV007 was isolated from a diseased European Beech (Fagus sylvatica) in Malmö, Sweden in 2016. The draft genome of P. cactorum strain LV007 is 67.81 Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.</p>}},
  author       = {{Grenville-Briggs, Laura J. and Kushwaha, Sandeep K. and Cleary, Michelle R. and witzell, johanna and Savenkov, Eugene I. and Whisson, Stephen C. and Chawade, Aakash and Vetukuri, Ramesh R.}},
  issn         = {{2213-5960}},
  language     = {{eng}},
  month        = {{06}},
  pages        = {{155--156}},
  publisher    = {{Elsevier}},
  series       = {{Genomics Data}},
  title        = {{Draft genome of the oomycete pathogen Phytophthora cactorum strain LV007 isolated from European beech (Fagus sylvatica)}},
  url          = {{http://dx.doi.org/10.1016/j.gdata.2017.05.010}},
  doi          = {{10.1016/j.gdata.2017.05.010}},
  volume       = {{12}},
  year         = {{2017}},
}