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Crystal structure of a copper-transporting PIB-type ATPase

Gourdon, Pontus LU ; Liu, Xiang-Yu ; Skjørringe, Tina ; Morth, J Preben ; Møller, Lisbeth Birk ; Pedersen, Bjørn Panyella and Nissen, Poul (2011) In Nature 475(7354). p.59-64
Abstract

Heavy-metal homeostasis and detoxification is crucial for cell viability. P-type ATPases of the class IB (PIB) are essential in these processes, actively extruding heavy metals from the cytoplasm of cells. Here we present the structure of a PIB-ATPase, a Legionella pneumophila CopA Cu(+)-ATPase, in a copper-free form, as determined by X-ray crystallography at 3.2 Å resolution. The structure indicates a three-stage copper transport pathway involving several conserved residues. A PIB-specific transmembrane helix kinks at a double-glycine motif displaying an amphipathic helix that lines a putative copper entry point at the intracellular interface. Comparisons to Ca(2+)-ATPase suggest an ATPase-coupled copper release mechanism from the... (More)

Heavy-metal homeostasis and detoxification is crucial for cell viability. P-type ATPases of the class IB (PIB) are essential in these processes, actively extruding heavy metals from the cytoplasm of cells. Here we present the structure of a PIB-ATPase, a Legionella pneumophila CopA Cu(+)-ATPase, in a copper-free form, as determined by X-ray crystallography at 3.2 Å resolution. The structure indicates a three-stage copper transport pathway involving several conserved residues. A PIB-specific transmembrane helix kinks at a double-glycine motif displaying an amphipathic helix that lines a putative copper entry point at the intracellular interface. Comparisons to Ca(2+)-ATPase suggest an ATPase-coupled copper release mechanism from the binding sites in the membrane via an extracellular exit site. The structure also provides a framework to analyse missense mutations in the human ATP7A and ATP7B proteins associated with Menkes' and Wilson's diseases.

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publishing date
type
Contribution to journal
publication status
published
keywords
Adenosine Triphosphatases, Bacterial Proteins, Binding Sites, Biological Transport, Calcium, Cation Transport Proteins, Cell Membrane, Copper, Crystallography, X-Ray, Cytoplasm, Hepatolenticular Degeneration, Humans, Legionella pneumophila, Menkes Kinky Hair Syndrome, Models, Molecular, Mutation, Missense, Protein Structure, Tertiary, Sarcoplasmic Reticulum Calcium-Transporting ATPases, Structure-Activity Relationship, Journal Article, Research Support, Non-U.S. Gov't
in
Nature
volume
475
issue
7354
pages
59 - 64
publisher
Nature Publishing Group
external identifiers
  • scopus:79960033247
  • pmid:21716286
ISSN
0028-0836
DOI
10.1038/nature10191
language
English
LU publication?
no
id
f5085167-efb6-42fe-8849-4c53d78077af
date added to LUP
2017-04-29 15:31:24
date last changed
2024-04-14 10:16:09
@article{f5085167-efb6-42fe-8849-4c53d78077af,
  abstract     = {{<p>Heavy-metal homeostasis and detoxification is crucial for cell viability. P-type ATPases of the class IB (PIB) are essential in these processes, actively extruding heavy metals from the cytoplasm of cells. Here we present the structure of a PIB-ATPase, a Legionella pneumophila CopA Cu(+)-ATPase, in a copper-free form, as determined by X-ray crystallography at 3.2 Å resolution. The structure indicates a three-stage copper transport pathway involving several conserved residues. A PIB-specific transmembrane helix kinks at a double-glycine motif displaying an amphipathic helix that lines a putative copper entry point at the intracellular interface. Comparisons to Ca(2+)-ATPase suggest an ATPase-coupled copper release mechanism from the binding sites in the membrane via an extracellular exit site. The structure also provides a framework to analyse missense mutations in the human ATP7A and ATP7B proteins associated with Menkes' and Wilson's diseases.</p>}},
  author       = {{Gourdon, Pontus and Liu, Xiang-Yu and Skjørringe, Tina and Morth, J Preben and Møller, Lisbeth Birk and Pedersen, Bjørn Panyella and Nissen, Poul}},
  issn         = {{0028-0836}},
  keywords     = {{Adenosine Triphosphatases; Bacterial Proteins; Binding Sites; Biological Transport; Calcium; Cation Transport Proteins; Cell Membrane; Copper; Crystallography, X-Ray; Cytoplasm; Hepatolenticular Degeneration; Humans; Legionella pneumophila; Menkes Kinky Hair Syndrome; Models, Molecular; Mutation, Missense; Protein Structure, Tertiary; Sarcoplasmic Reticulum Calcium-Transporting ATPases; Structure-Activity Relationship; Journal Article; Research Support, Non-U.S. Gov't}},
  language     = {{eng}},
  month        = {{06}},
  number       = {{7354}},
  pages        = {{59--64}},
  publisher    = {{Nature Publishing Group}},
  series       = {{Nature}},
  title        = {{Crystal structure of a copper-transporting PIB-type ATPase}},
  url          = {{http://dx.doi.org/10.1038/nature10191}},
  doi          = {{10.1038/nature10191}},
  volume       = {{475}},
  year         = {{2011}},
}