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- 2013
-
Mark
SBSI: an extensible distributed software infrastructure for parameter estimation in systems biology
(
- Contribution to journal › Article
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Mark
Dynamic Analysis of Gene Expression and Genome-wide Transcription Factor Binding during Lineage Specification of Multipotent Progenitors
(
- Contribution to journal › Article
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Mark
Methods for analyzing high dimensional data for classifying, diagnosing, prognosticating, and/or predicting diseases and other biological states
2013) US8620592(
- Patent › Patent
- 2012
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Mark
Probing the role of stochasticity in a model of the embryonic stem cell - heterogeneous gene expression and reprogramming efficiency
(
- Contribution to journal › Article
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Mark
VarioML framework for comprehensive variation data representation and exchange
(
- Contribution to journal › Article
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Mark
Analysis of case-control association studies with known risk variants
(
- Contribution to journal › Article
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Mark
Mechanistic Basis of Branch-Site Selection in Filamentous Bacteria
(
- Contribution to journal › Article
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Mark
Binding of two intrinsically disordered peptides to a multi-specific protein: a combined Monte Carlo and molecular dynamics study
(
- Contribution to journal › Article
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Mark
SeqFIRE : a web application for automated extraction of indel regions and conserved blocks from protein multiple sequence alignments
(
- Contribution to journal › Article
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Mark
Sets of probes and primers for the diagnosis of select cancers
2012) US8263759(
- Patent › Patent
- 2011
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Mark
Models of sequestration and receptor cross-talk for explaining multiple mutants in plant stem cell regulation.
(
- Contribution to journal › Article
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Mark
A Computational and Experimental Study of the Regulatory Mechanisms of the Complement System
(
- Contribution to journal › Article
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Mark
Simulating the Mammalian blastocyst - molecular and mechanical interactions pattern the embryo.
(
- Contribution to journal › Article
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Mark
Binding Free Energy Landscape of Domain-Peptide Interactions
(
- Contribution to journal › Article
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Mark
Multiple light inputs to a simple clock circuit allow complex biological rhythms
(
- Contribution to journal › Article
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Mark
Laboratory data and sample management for proteomics.
(
- Chapter in Book/Report/Conference proceeding › Book chapter
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Mark
Gene expression of the endolymphatic sac
(
- Contribution to journal › Article
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Mark
Methods for analyzing high dimensional data for classifying, diagnosing, prognosticating, and/or predicting diseases and other biological states
2011) US8065092(
- Patent › Patent
- 2010
-
Mark
Integrative analysis of gene expression and copy number alterations using canonical correlation analysis
(
- Contribution to journal › Article
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Mark
Detecting microRNA activity from gene expression data
(
- Contribution to journal › Article
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Mark
A cell-based model for quorum sensing in heterogeneous bacterial colonies.
(
- Contribution to journal › Article
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Mark
Quantitative Analysis of Immune Response and Erythropoiesis during Rodent Malarial Infection
(
- Contribution to journal › Article
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Mark
Selections of genes and methods of using the same for diagnosis and for targeting the therapy of select cancers
2010) US7655397(
- Patent › Patent
-
Mark
Methods for analyzing high dimensional data for classifying, diagnosing, prognosticating, and/or predicting diseases and other biological states
2010) US7774143(
- Patent › Patent
-
Mark
Methods for analyzing high dimensional data for classifying, diagnosing, prognosticating, and/or predicting diseases and other biological states
2010) US7783431(
- Patent › Patent
-
Mark
Direct decomposition of three-way arrays using a non-negative approximation
(
- Contribution to journal › Article
- 2009
-
Mark
A module-based analytical strategy to identify novel disease-associated genes shows an inhibitory role for interleukin 7 Receptor in allergic inflammation
(
- Contribution to journal › Article
-
Mark
How to find simple and accurate rules for viral protease cleavage specificities
(
- Contribution to journal › Article
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Mark
Ultrasome: efficient aberration caller for copy number studies of ultra-high resolution
(
- Contribution to journal › Article
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Mark
RAMI: a tool for identification and characterization of phylogenetic clusters in microbial communities
(
- Contribution to journal › Article
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Mark
Computational Modeling of the Hematopoietic Erythroid-Myeloid Switch Reveals Insights into Cooperativity, Priming, and Irreversibility
(
- Contribution to journal › Article
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Mark
Computational modelling of cancerous mutations in the EGFR/ERK signalling pathway
(
- Contribution to journal › Article
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Mark
BASE--2nd generation software for microarray data management and analysis.
(
- Contribution to journal › Article
-
Mark
The Proteios Software Environment: an extensible multiuser platform for management and analysis of proteomics data
(
- Contribution to journal › Article
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Mark
Weather and Seasons Together Demand Complex Biological Clocks
(
- Contribution to journal › Article
- 2008
-
Mark
Formation and Growth of Oligomers: A Monte Carlo Study of an Amyloid Tau Fragment
(
- Contribution to journal › Article
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Mark
PseudoGeneQuest - service for identification of different pseudogene types in the human genome.
(
- Contribution to journal › Article
-
Mark
Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios.
(
- Contribution to journal › Article
- 2007
-
Mark
Continuous-index hidden Markov modelling of array CGH copy number data.
(
- Contribution to journal › Article
-
Mark
Multiple spaced seeds for homology search
(
- Contribution to journal › Article
-
Mark
Robust smooth segmentation approach for array CGH data analysis
(
- Contribution to journal › Article
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Mark
Classification of genomic and proteomic data using support vector machines
2007) p.187-202(
- Chapter in Book/Report/Conference proceeding › Book chapter
-
Mark
Regression analysis and modelling of data acquisition for SELDI-TOF mass spectrometry.
(
- Contribution to journal › Article
-
Mark
SPECLUST: a web tool for clustering of mass spectra
2007) In LU TP 07-14(
- Book/Report › Report
- 2006
-
Mark
Transcriptional dynamics of the embryonic stem cell switch
(
- Contribution to journal › Article
-
Mark
Methodological study of affine transformations of gene expression data with proposed robust non-parametric multi-dimensional normalization method
(
- Contribution to journal › Article
-
Mark
A statistical score for assessing the quality of multiple sequence alignments.
(
- Contribution to journal › Article
-
Mark
2DDB – a bioinformatics solution for analysis of quantitative proteomics data
(
- Contribution to journal › Article
-
Mark
Microarray image analysis: background estimation using quantile and morphological filters
(
- Contribution to journal › Article
-
Mark
Improving missing value imputation of microarray data by using spot quality weights
(
- Contribution to journal › Article