Protein Evolution
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- 2023
-
Mark
uORF4u : a tool for annotation of conserved upstream open reading frames
- Contribution to journal › Article
-
Mark
The structural basis of hyperpromiscuity in a core combinatorial network of type II toxin-antitoxin and related phage defense systems
Ernits, Karin LU ; Saha, Chayan Kumar LU
; Brodiazhenko, Tetiana
; Chouhan, Bhanu
LU
; Shenoy, Aditi
; Buttress, Jessica A
; Duque-Pedraza, Julián J
LU
; Bojar, Veda
LU
; Nakamoto, Jose A
LU
and Kurata, Tatsuaki
LU
, et al.
(2023)
In Proceedings of the National Academy of Sciences of the United States of America
120(33).
p.1-12
- Contribution to journal › Article
-
Mark
The structure of DarB in complex with RelNTD reveals nonribosomal activation of Rel stringent factors
- Contribution to journal › Article
- 2022
-
Mark
A hyperpromiscuous antitoxin protein domain for the neutralization of diverse toxin domains
Kurata, Tatsuaki LU ; Saha, Chayan Kumar LU
; Buttress, Jessica A
; Mets, Toomas
; Brodiazhenko, Tetiana
; Turnbull, Kathryn J
; Awoyomi, Ololade F
; Oliveira, Sofia Raquel Alves
; Jimmy, Steffi
and Ernits, Karin
LU
, et al.
(2022)
In Proceedings of the National Academy of Sciences of the United States of America
119(6).
p.1-12
- Contribution to journal › Article
-
Mark
Sal-type ABC-F proteins : Intrinsic and common mediators of pleuromutilin resistance by target protection in staphylococci
Mohamad, Merianne ; Nicholson, David ; Saha, Chayan Kumar LU
; Hauryliuk, Vasili
LU
; Edwards, Thomas A
; Atkinson, Gemma C
LU
; Ranson, Neil A
and O'Neill, Alex J
(2022)
In Nucleic Acids Research
50(4).
p.2128-2142
- Contribution to journal › Article
-
Mark
Structural basis for PoxtA-mediated resistance to phenicol and oxazolidinone antibiotics
Crowe-McAuliffe, Caillan ; Murina, Victoriia ; Turnbull, Kathryn Jane ; Huch, Susanne ; Kasari, Marje ; Takada, Hiraku ; Nersisyan, Lilit ; Sundsfjord, Arnfinn ; Hegstad, Kristin and Atkinson, Gemma C LU
, et al.
(2022)
In Nature Communications
13.
- Contribution to journal › Article
-
Mark
Context-based sensing of orthosomycin antibiotics by the translating ribosome
Mangano, Kyle ; Marks, James ; Klepacki, Dorota ; Saha, Chayan Kumar LU
; Atkinson, Gemma C.
LU
; Vázquez-Laslop, Nora
and Mankin, Alexander S.
(2022)
In Nature Chemical Biology
18(11).
p.1277-1286
- Contribution to journal › Article
-
Mark
Expression of Bacillus subtilis ABCF antibiotic resistance factor VmlR is regulated by RNA polymerase pausing, transcription attenuation, translation attenuation and (p)ppGpp
Hiraku, Takada LU ; Mandell, Zachary F ; Yakhnin, Helen ; Glazyrina, Anastasiya ; Chiba, Shinobu ; Kurata, Tatsuaki LU ; Wu, Kelvin J Y ; Tresco, Ben I C ; Myers, Andrew G and Atkinson, Gemma LU
, et al.
(2022)
In Nucleic Acids Research
50(11).
p.6174-6189
- Contribution to journal › Article
-
Mark
Structural basis for HflXr-mediated antibiotic resistance in Listeria monocytogenes
Koller, Timm O ; Turnbull, Kathryn J ; Vaitkevicius, Karolis ; Crowe-McAuliffe, Caillan ; Roghanian, Mohammad LU
; Bulvas, Ondřej
; Nakamoto, Jose A
LU
; Kurata, Tatsuaki
LU
; Julius, Christina
LU
and Atkinson, Gemma C
LU
, et al.
(2022)
In Nucleic Acids Research
50(19).
p.11285-11300
- Contribution to journal › Article
- 2021
-
Mark
(p)ppGpp controls stringent factors by exploiting antagonistic allosteric coupling between catalytic domains
Roghanian, Mohammad ; Van Nerom, Katleen ; Takada, Hiraku ; Caballero-Montes, Julien ; Tamman, Hedvig ; Kudrin, Pavel ; Talavera, Ariel ; Dzhygyr, Ievgen ; Ekström, Simon LU and Atkinson, Gemma C LU
, et al.
(2021)
In Molecular Cell
81(16).
p.6-3322
- Contribution to journal › Article