Gemma Atkinson

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2025
Mark The Viral AlphaFold Database of monomers and homodimers reveals conserved protein folds in viruses of bacteria, archaea, and eukaryotes
Odai, Roni ^LU ; Leemann, Michèle ; Al-Murad, Tamim ; Abdullah, Minhal ^LU ; Shyrokova, Lena ^LU ; Tenson, Tanel ; Hauryliuk, Vasili ^LU ; Durairaj, Janani ; Pereira, Joana ^LU and Atkinson, Gemma C ^LU (2025) In Science Advances 11(40). p.1-14
- Contribution to journal › Article
Mark LoVis4u : a locus visualization tool for comparative genomics and coverage profiles
Egorov, Artyom A. ^LU and Atkinson, Gemma C. ^LU (2025) In NAR Genomics and Bioinformatics 7(1).
- Contribution to journal › Article
Mark Mechanisms of neutralization of toxSAS from toxin-antitoxin modules
Dominguez-Molina, Lucia ; Kurata, Tatsuaki ^LU ; Cepauskas, Albinas ; Echemendia-Blanco, Dannele ; Zedek, Safia ; Talavera-Perez, Ariel ; Atkinson, Gemma C ^LU ; Hauryliuk, Vasili ^LU and Garcia-Pino, Abel (2025) In Nature Chemical Biology 21. p.182-192
- Contribution to journal › Article
2024
Mark Toxic small alarmone synthetase FaRel2 inhibits translation by pyrophosphorylating tRNAGly and tRNAThr
Kurata, Tatsuaki ^LU ; Takegawa, Masaki ; Ohira, Takayuki ; Syroegin, Egor A ; Atkinson, Gemma C ^LU ; Johansson, Marcus J O ^LU ; Polikanov, Yury S ; Garcia-Pino, Abel ; Suzuki, Tsutomu and Hauryliuk, Vasili ^LU (2024) In Science Advances 10(46).
- Contribution to journal › Article
Mark A role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis
Takada, Hiraku ; Paternoga, Helge ; Fujiwara, Keigo ; Nakamoto, Jose A ^LU ; Park, Esther N ; Dimitrova-Paternoga, Lyudmila ; Beckert, Bertrand ; Saarma, Merilin ; Tenson, Tanel and Buskirk, Allen R , et al. (2024) In Nucleic Acids Research 52(14).
- Contribution to journal › Article
Mark Mechanism of phage sensing and restriction by toxin-antitoxin-chaperone systems
Mets, Toomas ^LU ; Kurata, Tatsuaki ^LU ; Ernits, Karin ^LU ; Johansson, Marcus J O ^LU ; Craig, Sophie Z ; Evora, Gabriel Medina ; Buttress, Jessica A ; Odai, Roni ^LU ; Wallant, Kyo Coppieters't and Nakamoto, Jose A ^LU , et al. (2024) In Cell Host and Microbe 32(7). p.8-1073
- Contribution to journal › Article
Mark A Comprehensive Resource for Exploring Antiphage Defense : DefenseFinder Webservice,Wiki and Databases
Tesson, Florian ; Planel, Rémi ; Egorov, Artyom A. ^LU ; Georjon, Héloïse ; Vaysset, Hugo ; Brancotte, Bryan ; Néron, Bertrand ; Mordret, Ernest ; Atkinson, Gemma Catherine ^LU and Bernheim, Aude , et al. (2024) In Peer Community Journal 4.
- Contribution to journal › Article
Mark Activity, structure, and diversity of Type II proline-rich antimicrobial peptides from insects
Huang, Weiping ; Baliga, Chetana ; Aleksandrova, Elena V. ; Atkinson, Gemma ^LU ; Polikanov, Yury S. ; Vázquez-Laslop, Nora and Mankin, Alexander S. (2024) In EMBO Reports 25(11). p.5194-5211
- Contribution to journal › Article
Mark Resolution of ribosomal stalling by EF-P and ABCF ATPases YfmR and YkpA/YbiT
Takada, Hiraku ; Fujiwara, Keigo ; Atkinson, Gemma C ^LU ; Chiba, Shinobu and Hauryliuk, Vasili ^LU (2024) In Nucleic Acids Research 52(16). p.9854-9866
- Contribution to journal › Article
Mark Peptidyl-tRNA hydrolase is the nascent chain release factor in bacterial ribosome-associated quality control
Svetlov, Maxim S. ; Dunand, Clémence F. ; Nakamoto, Jose A. ^LU ; Atkinson, Gemma C. ^LU ; Safdari, Haaris A. ; Wilson, Daniel N. ; Vázquez-Laslop, Nora and Mankin, Alexander S. (2024) In Molecular Cell 84(4). p.5-726
- Contribution to journal › Article

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