Albertas Dvirnas

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2025
Mark Stained DNA Dot Detection (SD³) : An automated tool for quantifying fluorescent features along single stretched DNA molecules
Aning, Obed A. ; Dvirnas, Albertas ^LU ; Nyblom, My ; Krog, Jens ^LU ; Carlson, Johanna ; Johansson, Pegah ; Ambjörnsson, Tobias ^LU and Westerlund, Fredrik (2025) In DNA Repair 149.
- Contribution to journal › Article
Mark Photophysical image analysis for sCMOS cameras: Noise modelling and estimation of background parameters in fluorescence-microscopy images
Mohanta, Dibyajyoti ^LU ; Kunnath, Radhika ; Clarkson, Erik ^LU ; Dvirnas, Albertas ^LU ; Westerlund, Fredrik and Ambjörnsson, Tobias ^LU (2025) In PLOS ONE 20(11).
- Contribution to journal › Article
Mark Random sampling of ligand arrangements on a one-dimensional lattice
Mohanta, Dibyajyoti ^LU ; Dvirnas, Albertas ^LU and Ambjörnsson, Tobias ^LU (2025) In Physical Review E 111(1).
- Contribution to journal › Article
Mark DOGMA : de novo assembly of densely labelled optical DNA maps using a matrix profile approach
Dvirnas, Albertas ^LU ; Leal-Garza, Luis Mario ; Abbaspour, Zahra ; Fröbrant, Erik ; Frykholm, Karolin ; Wrande, Marie ; Sandegren, Linus ; Westerlund, Fredrik and Ambjörnsson, Tobias ^LU (2025) In PLOS ONE 20(12 December).
- Contribution to journal › Article
2024
Mark Photophysical image analysis : Unsupervised probabilistic thresholding for images from electron-multiplying charge-coupled devices
Krog, Jens ^LU ; Dvirnas, Albertas ^LU ; Ström, Oskar E ^LU ; Beech, Jason P ^LU ; Tegenfeldt, Jonas O ^LU ; Müller, Vilhelm ; Westerlund, Fredrik and Ambjörnsson, Tobias ^LU (2024) In PLoS ONE 19(4).
- Contribution to journal › Article
2023
Mark Equilibrium melting probabilities of a DNA molecule with a defect : An exact solution of the Poland-Scheraga model
Genthon, Arthur ; Dvirnas, Albertas ^LU and Ambjörnsson, Tobias ^LU (2023) In Journal of Chemical Physics 159(14).
- Contribution to journal › Article
2021
Mark Methods for barcode analysis in optical DNA mapping
Dvirnas, Albertas ^LU (2021)
- Thesis › Doctoral thesis (compilation)
Mark Detection of structural variations in densely-labelled optical DNA barcodes : A hidden Markov model approach
Dvirnas, Albertas ^LU ; Stewart, Callum ; Müller, Vilhelm ; Bikkarolla, Santosh Kumar ; Frykholm, Karolin ; Sandegren, Linus ; Kristiansson, Erik ; Westerlund, Fredrik and Ambjörnsson, Tobias ^LU (2021) In PLoS ONE 16(11 November).
- Contribution to journal › Article
2020
Mark Cultivation-Free Typing of Bacteria Using Optical DNA Mapping
Müller, Vilhelm ; Nyblom, My ; Johnning, Anna ; Wrande, Marie ; Dvirnas, Albertas ^LU ; Kk, Sriram ; Giske, Christian G. ; Ambjörnsson, Tobias ^LU ; Sandegren, Linus and Kristiansson, Erik , et al. (2020) In ACS Infectious Diseases 6(5). p.1076-1084
- Contribution to journal › Article
2019
Mark Enzyme-free optical DNA mapping of the human genome using competitive binding
Müller, Vilhelm ; Dvirnas, Albertas ^LU ; Andersson, John ; Singh, Vandana ; Kk, Sriram ; Johansson, Pegah ; Ebenstein, Yuval ; Ambjörnsson, Tobias ^LU and Westerlund, Fredrik (2019) In Nucleic Acids Research 47(15).
- Contribution to journal › Article

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