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2024
Mark Photophysical image analysis : Unsupervised probabilistic thresholding for images from electron-multiplying charge-coupled devices
Krog, Jens ^LU ; Dvirnas, Albertas ^LU ; Ström, Oskar E ^LU ; Beech, Jason P ^LU ; Tegenfeldt, Jonas O ^LU ; Müller, Vilhelm ; Westerlund, Fredrik and Ambjörnsson, Tobias ^LU (2024) In PLoS ONE 19(4). p.0300122-0300122
- Contribution to journal › Article
2021
Mark Detection of structural variations in densely-labelled optical DNA barcodes : A hidden Markov model approach
Dvirnas, Albertas ^LU ; Stewart, Callum ; Müller, Vilhelm ; Bikkarolla, Santosh Kumar ; Frykholm, Karolin ; Sandegren, Linus ; Kristiansson, Erik ; Westerlund, Fredrik and Ambjörnsson, Tobias ^LU (2021) In PLoS ONE 16(11 November).
- Contribution to journal › Article
2020
Mark Cultivation-Free Typing of Bacteria Using Optical DNA Mapping
Müller, Vilhelm ; Nyblom, My ; Johnning, Anna ; Wrande, Marie ; Dvirnas, Albertas ^LU ; Kk, Sriram ; Giske, Christian G. ; Ambjörnsson, Tobias ^LU ; Sandegren, Linus and Kristiansson, Erik , et al. (2020) In ACS Infectious Diseases 6(5). p.1076-1084
- Contribution to journal › Article
2019
Mark Enzyme-free optical DNA mapping of the human genome using competitive binding
Müller, Vilhelm ; Dvirnas, Albertas ^LU ; Andersson, John ; Singh, Vandana ; Kk, Sriram ; Johansson, Pegah ; Ebenstein, Yuval ; Ambjörnsson, Tobias ^LU and Westerlund, Fredrik (2019) In Nucleic Acids Research 47(15).
- Contribution to journal › Article
Mark Bacterial identification by optical mapping of genomic DNA in nanofluidic channels
Nyblom, My ; Müller, Vilhelm ; Johnning, Anna ; Wrande, Marie ; Dvirnas, Albertas ^LU ; Sriram, K. K. ; Giske, Christian G. ; Ambjörnsson, Tobias ^LU ; Sandegren, Linus and Kristiansson, Erik , et al. (2019) 23rd International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2019 In 23rd International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2019 p.821-822
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
Mark Optical DNA Mapping Combined with Cas9-Targeted Resistance Gene Identification for Rapid Tracking of Resistance Plasmids in a Neonatal Intensive Care Unit Outbreak
Bikkarolla, Santosh K. ; Nordberg, Viveka ; Rajer, Fredrika ; Müller, Vilhelm ; Kabir, Muhammad Humaun ; Kk, Sriram ; Dvirnas, Albertas ^LU ; Ambjörnsson, Tobias ^LU ; Giske, Christian G. and Navér, Lars , et al. (2019) In mBio 10(4).
- Contribution to journal › Article
2018
Mark The resistomes of six carbapenem-resistant pathogens - a critical genotype-phenotype analysis
Johnning, Anna ; Karami, Nahid ; Tång Hallbäck, Erika ; Müller, Vilhelm ; Nyberg, Lena ; Buongermino Pereira, Mariana ; Stewart, Callum ; Ambjörnsson, Tobias ^LU ; Westerlund, Fredrik and Adlerberth, Ingegerd , et al. (2018) In Microbial Genomics 4(11).
- Contribution to journal › Article
Mark Facilitated sequence assembly using densely labeled optical DNA barcodes : A combinatorial auction approach
Dvirnas, Albertas ^LU ; Pichler, Christoffer ^LU ; Stewart, Callum L. ; Quaderi, Saair ; Nyberg, Lena K. ; Müller, Vilhelm ; Bikkarolla, Santosh Kumar ; Kristiansson, Erik ; Sandegren, Linus and Westerlund, Fredrik , et al. (2018) In PLoS ONE 13(3).
- Contribution to journal › Article
2017
Mark Noise reduction in single time frame optical DNA maps
Torche Pedreschi, Paola C. ; Müller, Vilhelm ; Westerlund, Fredrik and Ambjörnsson, Tobias ^LU (2017) In PLoS ONE 12(6).
- Contribution to journal › Article
2016
Mark Detailed characterization of plasmids carrying resistance genes using optical DNA mapping
Müller, Vilhelm ; Nyberg, Lena K. ; Quaderi, Saair ; Kristiansson, Erik ; Ambjörnsson, Tobias ^LU ; Sandegren, Linus and Westerlund, Fredrik (2016) 20th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2016 p.1561-1562
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding

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