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- 2024
-
Mark
Peptide clustering enhances large-scale analyses and reveals proteolytic signatures in mass spectrometry data
Hartman, Erik LU ; Forsberg, Fredrik LU ; Kjellström, Sven LU ; Petrlova, Jitka LU ; Luo, Congyu LU ; Scott, Aaron LU ; Puthia, Manoj LU ; Malmström, Johan LU
and Schmidtchen, Artur
LU
(2024)
In Nature Communications
15(1).
- Contribution to journal › Article
-
Mark
Decoding of the surfaceome and endocytome in primary glioblastoma cells identifies potential target antigens in the hypoxic tumor niche
de Oliveira, Kelin Gonçalves LU ; Bång-Rudenstam, Anna LU
; Beyer, Sarah
LU
; Boukredine, Axel
LU
; Talbot, Hugo
LU
; Governa, Valeria
LU
; Johansson, Maria C
LU
; Månsson, Ann-Sofie
LU
; Forsberg-Nilsson, Karin
and Bengzon, Johan
LU
, et al.
(2024)
In Acta Neuropathologica Communications
12(1).
- Contribution to journal › Article
-
Mark
Proteomic profiling reveals that ESR1 mutations enhance cyclin-dependent kinase signaling
De Marchi, Tommaso LU ; Lai, Chun-Fui ; Simmons, Georgia M ; Goldsbrough, Isabella ; Harrod, Alison ; Lam, Thai ; Buluwela, Lakjaya ; Kjellström, Sven LU ; Brueffer, Christian LU
and Saal, Lao H
LU
, et al.
(2024)
In Scientific Reports
14.
p.1-16
- Contribution to journal › Article
- 2023
-
Mark
Interpreting biologically informed neural networks for enhanced proteomic biomarker discovery and pathway analysis
Hartman, Erik LU ; Scott, Aaron M LU ; Karlsson, Christofer LU ; Mohanty, Tirthankar LU ; Vaara, Suvi T ; Linder, Adam LU ; Malmström, Lars LU and Malmström, Johan LU
(2023)
In Nature Communications
14.
p.1-13
- Contribution to journal › Article
-
Mark
In Vivo Profiling of the Vascular Cell Surface Proteome in Murine Models of Bacteremia
Spliid, Charlotte ; Esko, Jeffrey D ; Malmström, Johan LU
and Toledo, Alejandro Gomez
LU
(2023)
In Methods in molecular biology (Clifton, N.J.)
p.285-293
- Chapter in Book/Report/Conference proceeding › Book chapter
- 2011
-
Mark
A high-confidence human plasma proteome reference set with estimated concentrations in PeptideAtlas
Farrah, Terry ; Deutsch, Eric W ; Omenn, Gilbert S ; Campbell, David S ; Sun, Zhi ; Bletz, Julie A ; Mallick, Parag ; Katz, Jonathan E ; Malmström, Johan LU
and Ossola, Reto
, et al.
(2011)
In Molecular & Cellular Proteomics
10(9).
p.110-006353
- Contribution to journal › Article
- 2009
-
Mark
Perspectives of targeted mass spectrometry for protein biomarker verification
Hüttenhain, Ruth ; Malmström, Johan LU
; Picotti, Paola
and Aebersold, Ruedi
(2009)
In Current Opinion in Chemical Biology
13(5-6).
p.25-518
- Contribution to journal › Article
-
Mark
Proteome-wide cellular protein concentrations of the human pathogen Leptospira interrogans
Malmström, Johan LU
; Beck, Martin
; Schmidt, Alexander
; Lange, Vinzenz
; Deutsch, Eric W.
and Aebersold, Ruedi
(2009)
In Nature
460(7256).
p.5-762
- Contribution to journal › Letter
- 2008
-
Mark
Rtt101 and Mms1 in budding yeast form a CUL4(DDB1)-like ubiquitin ligase that promotes replication through damaged DNA
Zaidi, Iram Waris ; Rabut, Gwénaël ; Poveda, Ana ; Scheel, Hartmut ; Malmström, Johan LU
; Ulrich, Helle
; Hofmann, Kay
; Pasero, Philippe
; Peter, Matthias
and Luke, Brian
(2008)
In EMBO Reports
9(10).
p.40-1034
- Contribution to journal › Article
- 2007
-
Mark
Simian Virus 40 depends on ER protein folding and quality control factors for entry into host cells
Schelhaas, Mario ; Malmström, Johan LU
; Pelkmans, Lucas
; Haugstetter, Johannes
; Ellgaard, Lars
; Grünewald, Kay
and Helenius, Ari
(2007)
In Cell
131(3).
p.29-516
- Contribution to journal › Article