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2025
Mark Considerations and Software for Successful Immune Cell Deconvolution Using Proteomics Data
Zamore, Måns ^LU ; Junior, Sergio Mosquim ^LU ; Andree, Sebastian L ^LU ; Altunbulakli, Can ^LU ; Lindstedt, Malin ^LU and Levander, Fredrik ^LU (2025) In Journal of Proteome Research 24(8). p.3751-3761
- Contribution to journal › Article
2021
Mark The Alterations of Mitochondrial Function during NAFLD Progression : An Independent Effect of Mitochondrial ROS Production
Simões, Inês C M ; Amorim, Ricardo ; Teixeira, José ; Karkucinska-Wieckowska, Agnieszka ; Carvalho, Adriana ; Pereira, Susana P ; Simões, Rui F ^LU ; Szymanska, Sylwia ; Dąbrowski, Michał and Janikiewicz, Justyna , et al. (2021) In International Journal of Molecular Sciences 22(13). p.1-24
- Contribution to journal › Article
Mark COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms
Ostaszewski, Marek ; Marchesi, Silvia ^LU and Schneider, Reinhard (2021) In Molecular Systems Biology 17(10).
- Contribution to journal › Article
2020
Mark Butler enables rapid cloud-based analysis of thousands of human genomes
Yakneen, Sergei ; Waszak, Sebastian M ; Gertz, Michael and Korbel, Jan O (2020) In Nature Biotechnology 38(3). p.288-292
- Contribution to journal › Article
Mark Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig
Rubanova, Yulia ; Shi, Ruian ; Harrigan, Caitlin F ; Li, Roujia ; Wintersinger, Jeff ; Sahin, Nil ; Deshwar, Amit G and Morris, Quaid D (2020) In Nature Communications 11.
- Contribution to journal › Article
Mark Inferring structural variant cancer cell fraction
Cmero, Marek ; Yuan, Ke ; Ong, Cheng Soon ; Schröder, Jan ; Corcoran, Niall M ; Papenfuss, Tony ; Hovens, Christopher M ; Markowetz, Florian and Macintyre, Geoff (2020) In Nature Communications 11.
- Contribution to journal › Article
Mark Integrative pathway enrichment analysis of multivariate omics data
Paczkowska, Marta ; Barenboim, Jonathan ; Sintupisut, Nardnisa ; Fox, Natalie S ; Zhu, Helen ; Abd-Rabbo, Diala ; Mee, Miles W ; Boutros, Paul C and Reimand, Jüri (2020) In Nature Communications 11.
- Contribution to journal › Article
Mark A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns
Jiao, Wei ; Atwal, Gurnit ; Polak, Paz ; Karlic, Rosa ; Cuppen, Edwin ; Danyi, Alexandra ; de Ridder, Jeroen ; van Herpen, Carla ; Lolkema, Martijn P and Steeghs, Neeltje , et al. (2020) In Nature Communications 11.
- Contribution to journal › Article
Mark Pathway and network analysis of more than 2500 whole cancer genomes
Reyna, Matthew A ; Haan, David ; Paczkowska, Marta ; Verbeke, Lieven P C ; Vazquez, Miguel ; Kahraman, Abdullah ; Pulido-Tamayo, Sergio ; Barenboim, Jonathan ; Wadi, Lina and Dhingra, Priyanka , et al. (2020) In Nature Communications 11.
- Contribution to journal › Article
2019
Mark Proteomics of PTI and Two ETI Immune Reactions in Potato Leaves
Resjö, Svante ^LU ; Zahid, Muhammad Awais ; Burra, Dharani Dhar ; Lenman, Marit ^LU ; Levander, Fredrik ^LU and Andreasson, Erik ^LU (2019) In International Journal of Molecular Sciences 20(19).
- Contribution to journal › Article

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