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- 2023
-
Mark
Fast and sensitive validation of fusion transcripts in whole-genome sequencing data
(
- Contribution to journal › Article
-
Mark
Improved detection of clinically relevant fusion transcripts in cancer by machine learning classification
(
- Contribution to journal › Article
- 2022
-
Mark
Subtype and cell type specific expression of lncRNAs provide insight into breast cancer
(
- Contribution to journal › Article
-
Mark
RNA sequencing-based single sample predictors of molecular subtype and risk of recurrence for clinical assessment of early-stage breast cancer
(
- Contribution to journal › Published meeting abstract
-
Mark
Regulatory networks and 5' partner usage of miRNA host gene fusions in breast cancer
(
- Contribution to journal › Article
-
Mark
RNA sequencing-based single sample predictors of molecular subtype and risk of recurrence for clinical assessment of early-stage breast cancer
(
- Contribution to journal › Article
- 2021
-
Mark
Preexisting Somatic Mutations of Estrogen Receptor Alpha (ESR1) in Early-Stage Primary Breast Cancer
(
- Contribution to journal › Article
-
Mark
Molecular analyses of triple-negative breast cancer in the young and elderly
(
- Contribution to journal › Article
- 2020
-
Mark
Tumor genetic heterogeneity analysis of chronic sun-damaged melanoma
(
- Contribution to journal › Article
-
Mark
The mutational landscape of the SCAN‐B real‐world primary breast cancer transcriptome
(
- Contribution to journal › Article
-
Mark
Prognostic implications of the expression levels of different immunoglobulin heavy chain-encoding RNAs in early breast cancer
(
- Contribution to journal › Article
-
Mark
Comprehensive molecular comparison of BRCA1 hypermethylated and BRCA1 mutated triple negative breast cancers
(
- Contribution to journal › Article
-
Mark
Defining the mutational landscape of 3,217 primary breast cancer transcriptomes through large-scale RNA-seq within the Sweden Cancerome Analysis Network: Breast Project (SCAN-B; NCT03430492).
(
- Contribution to journal › Published meeting abstract
-
Mark
Analysis of fusion transcripts indicates widespread deregulation of snoRNAs and their host genes in breast cancer
(
- Contribution to journal › Article
-
Mark
Whole-genome sequencing of triple negative breast cancers in a standard population-based clinical setting
2020) UK Interdisciplinary Breast Cancer Symposium 2020 In Breast Cancer Research and Treatment 180. p.531-532(
- Contribution to journal › Published meeting abstract
-
Mark
The Mutational Landscape of the SCAN-B Real-World Primary Breast Cancer Transcriptome
2020)(
- Working paper/Preprint › Preprint in preprint archive
-
Mark
Abstract CT074: Pre-existing ESR1 mutations in early-stage primary breast cancer predict failure of endocrine therapy and poor survival
(
- Contribution to journal › Published meeting abstract
- 2019
-
Mark
Whole-genome sequencing of triple-negative breast cancers in a population-based clinical study
(
- Contribution to journal › Article
-
Mark
Prediction of lymph node metastasis in breast cancer by gene expression and clinicopathological models: Development and validation within a population based cohort.
(
- Contribution to journal › Article
-
Mark
Agreement between molecular subtyping and surrogate subtype classification: a contemporary population-based study of ER-positive/HER2-negative primary breast cancer
(
- Contribution to journal › Article
-
Mark
Cross comparison and prognostic assessment of breast cancer multigene signatures in a large population-based contemporary clinical series
(
- Contribution to journal › Article
-
Mark
The X-Linked DDX3X RNA Helicase Dictates Translation Reprogramming and Metastasis in Melanoma
(
- Contribution to journal › Article
- 2018
-
Mark
Microenvironmental control of breast cancer subtype elicited through paracrine platelet-derived growth factor-CC signaling
(
- Contribution to journal › Article
-
Mark
Abstract P3-02-02: Concordance between immunohistochemical and gene-expression based subtyping of early breast cancer using core needle biopsies and surgical specimens - experices from SCAN-B
(
- Contribution to journal › Published meeting abstract
-
Mark
Abstract P4-09-03: On the development and clinical value of RNA-sequencing-based classifiers for prediction of the five conventional breast cancer biomarkers: A report from the population-based multicenter SCAN-B study
(
- Contribution to journal › Published meeting abstract
-
Mark
Clinical Value of RNA Sequencing–Based Classifiers for Prediction of the Five Conventional Breast Cancer Biomarkers: A Report From the Population-Based Multicenter Sweden Cancerome Analysis Network—Breast Initiative
(
- Contribution to journal › Article
-
Mark
Abstract P1-06-01: Putting multigene signatures to the test: Prognostic assessment in population-based contemporary clinical breast cancer
(
- Contribution to journal › Published meeting abstract
-
Mark
Abstract P2-02-09: Breast cancer subtype distribution and circulating tumor DNA in response to neoadjuvant chemotherapy: Experiences from a preoperative cohort within SCAN-B
(
- Contribution to journal › Published meeting abstract
-
Mark
Multidimensional transcriptomics provides detailed information about immune cell distribution an identity in HER2+ breast tumors
2018) In BioRxiv(
- Working paper/Preprint › Preprint in preprint archive
- 2017
-
Mark
Abstract P1-07-17: The SCAN-B study: 5-year summary of a large-scale population-based prospective breast cancer translational genomics platform covering a wide geography of Sweden (NCT02306096)
(
- Contribution to journal › Published meeting abstract
-
Mark
Myoepithelium assessment with p63 immunostaining in formalinfixed paraffin-embedded breast cancer tissue pre-treated with RNA-later
(
- Contribution to journal › Published meeting abstract
-
Mark
Frequent miRNA-convergent fusion gene events in breast cancer
(
- Contribution to journal › Article
- 2016
-
Mark
Targeted sequencing of BRCA1 and BRCA2 across a large unselected breast cancer cohort suggests that one-third of mutations are somatic
(
- Contribution to journal › Article
-
Mark
Spatial Transcriptomics. Digital Pathology to Investigate Intratumor Heterogeneity in Breast Cancer.
2016) AGBT Advances in Genome Biology and Technology meeting.(
- Contribution to conference › Poster
-
Mark
Implementation of an Open Source Software solution for Laboratory Information Management and automated RNAseq data analysis in a large-scale Cancer Genomics initiative using BASE with extension package Reggie.
2016)(
- Working paper/Preprint › Preprint in preprint archive
- 2015
-
Mark
The Sweden Cancerome Analysis Network - Breast (SCAN-B) Initiative: a large-scale multicenter infrastructure towards implementation of breast cancer genomic analyses in the clinical routine.
(
- Contribution to journal › Article
- 2014
-
Mark
Molecular and genetic diversity in the metastatic process of melanoma.
(
- Contribution to journal › Article
- 2012
-
Mark
Molecular microheterogeneity of prostate specific antigen in seminal fluid by mass spectrometry.
(
- Contribution to journal › Article
- 2011
-
Mark
Bioinformatic strategies for unambiguous identification of prostate specific antigen in clinical samples
(
- Contribution to journal › Article
-
Mark
GOBO: Gene Expression-Based Outcome for Breast Cancer Online.
(
- Contribution to journal › Article
-
Mark
Laboratory data and sample management for proteomics.
(
- Chapter in Book/Report/Conference proceeding › Book chapter
- 2009
-
Mark
Proteomics Data Collection-5th ProDaC Workshop
(
- Contribution to journal › Article
-
Mark
The Proteios Software Environment: an extensible multiuser platform for management and analysis of proteomics data
(
- Contribution to journal › Article
-
Mark
Getting a grip on proteomics data - Proteomics Data Collection (ProDaC)
(
- Contribution to journal › Article
-
Mark
Proteomics data collection--4th ProDaC workshop 15 August 2008, Amsterdam, The Netherlands
(
- Contribution to journal › Article
-
Mark
BASE--2nd generation software for microarray data management and analysis.
(
- Contribution to journal › Article
- 2008
-
Mark
Proteomics Data Collection - 3rd ProDaC Workshop April 22nd 2008, Toledo, Spain
(
- Contribution to journal › Article
-
Mark
Proteomics Data Collection - 2nd ProDaC Workshop 5 October 2007, Seoul, Korea
(
- Contribution to journal › Article
- 2007
-
Mark
Proteomic variation is as large within as between strawberry varieties
(
- Contribution to journal › Article
-
Mark
Automated reporting from gel-based proteomics experiments using the open source Proteios database application
(
- Contribution to journal › Article
-
Mark
The Mass Distance Fingerprint: A statistical framework for de novo detection of predominant modifications using high-accuracy mass spectrometry
(
- Contribution to journal › Article
-
Mark
Proteomics Data Collection - the 1st ProDaC workshop 26 April 2007 Ecole Normale Supérieur, Lyon, France.
(
- Contribution to journal › Article
-
Mark
SPECLUST: a web tool for clustering of mass spectra
2007) In LU TP 07-14(
- Book/Report › Report
- 2006
-
Mark
Detection and identification of protein isoforms using cluster analysis of MALDI-MS mass spectra
(
- Contribution to journal › Article
-
Mark
Improving missing value imputation of microarray data by using spot quality weights
(
- Contribution to journal › Article
-
Mark
Keeping track of gel-based proteomics experiments using the open-source Proteios software
2006) 7th Siena meeting From genome to proteome(
- Contribution to conference › Abstract
- 2005
-
Mark
PROTEIOS: an open source proteomics initiative
(
- Contribution to journal › Article
- 2004
-
Mark
Improving automatic peptide mass fingerprint protein identification by combining many peak sets
(
- Contribution to journal › Article
-
Mark
ACID: a database for microarray clone information
(
- Contribution to journal › Article
- 2000
-
Mark
Local routing algorithms based on Potts neural networks.
(
- Contribution to journal › Article
- 1998
-
Mark
Is there screwiness at the end of the QCD cascades?
1998) In Journal of High Energy Physics(
- Contribution to journal › Article
-
Mark
Bose-Einstein and colour interference in W-pair decays
(
- Contribution to journal › Article
-
Mark
A Potts Neuron Approach to Communication Routing
(
- Contribution to journal › Article
- 1997
-
Mark
Colour: A computer program for QCD colour factor calculations
(
- Contribution to journal › Article
-
Mark
Colour Connections in e+e- annihilation
(
- Contribution to journal › Article
-
Mark
bbˉ -fragmentation and Bpπ correlations
(
- Contribution to journal › Article
- 1996
-
Mark
Properties of Hadronization in e+e- -Annihilation
1996)(
- Thesis › Doctoral thesis (compilation)
-
Mark
QCD event generators report in the CERN report Physics at LEP2
1996) In CERN Reports(
- Book/Report › Report
- 1994
-
Mark
Deuteron production in e+e−-annihilation
(
- Contribution to journal › Article
-
Mark
Colour Interference and Confinement Effects in W-pair Production
(
- Contribution to journal › Article
- 1993
-
Mark
Lambda-polarization in e+e--annihilation at the Z0-pole
1993) In Physics Letters. Section B: Nuclear, Elementary Particle and High-Energy Physics 303(3-4). p.350-354(
- Contribution to journal › Article