Johan Staaf

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2022
Mark Tumor purity adjusted beta values improve biological interpretability of high-dimensional DNA methylation data
Staaf, Johan ^LU and Aine, Mattias ^LU (2022) In PLoS ONE 17(9 September).
- Contribution to journal › Article
Mark RNA sequencing-based single sample predictors of molecular subtype and risk of recurrence for clinical assessment of early-stage breast cancer
Staaf, Johan ^LU ; Häkkinen, Jari ^LU ; Hegardt, Cecilia ^LU ; Saal, Lao H ^LU ; Kimbung, Siker ^LU ; Hedenfalk, Ingrid ^LU ; Lien, Tonje ; Sørlie, Therese ; Naume, Bjørn and Russnes, Hege , et al. (2022) In npj Breast Cancer 8. p.1-17
- Contribution to journal › Article
Mark SRIQ clustering : A fusion of Random Forest, QT clustering, and KNN concepts
Karlström, Jacob ^LU ; Aine, Mattias ^LU ; Staaf, Johan ^LU and Veerla, Srinivas ^LU (2022) In Computational and Structural Biotechnology Journal 20. p.1567-1579
- Contribution to journal › Article
Mark Feasibility of EBUS-TBNA for histopathological and molecular diagnostics of NSCLC-A retrospective single-center experience
Karadzovska-Kotevska, Marija ^LU ; Brunnström, Hans ^LU ; Kosieradzki, Jaroslaw ^LU ; Ek, Lars ^LU ; Estberg, Christel ^LU ; Staaf, Johan ^LU ; Barath, Stefan ^LU and Planck, Maria ^LU (2022) In PLoS ONE 17(2 February).
- Contribution to journal › Article
Mark Epigenome-wide three-way interaction study identifies a complex pattern between TRIM27, KIAA0226, and smoking associated with overall survival of early-stage NSCLC
Ji, Xinyu ; Lin, Lijuan ; Fan, Juanjuan ; Li, Yi ; Wei, Yongyue ; Shen, Sipeng ; Su, Li ; Shafer, Andrea ; Bjaanæs, Maria Moksnes and Karlsson, Anna ^LU , et al. (2022) In Molecular Oncology 16(3). p.717-731
- Contribution to journal › Article
2021
Mark Distinct mechanisms of resistance to fulvestrant treatment dictate level of ER independence and selective response to CDK inhibitors in metastatic breast cancer
Kaminska, Kamila ^LU ; Akrap, Nina ^LU ; Staaf, Johan ^LU ; Alves, Carla L ; Ehinger, Anna ^LU ; Ebbesson, Anna ^LU ; Hedenfalk, Ingrid ^LU ; Beumers, Lukas ^LU ; Veerla, Srinivas ^LU and Harbst, Katja ^LU , et al. (2021) In Breast cancer research : BCR 23(1). p.26-26
- Contribution to journal › Article
Mark Molecular analyses of triple-negative breast cancer in the young and elderly
Aine, Mattias ^LU ; Boyaci, Ceren ; Hartman, Johan ; Häkkinen, Jari ^LU ; Mitra, Shamik ^LU ; Campos, Ana Bosch ^LU ; Nimeus, Emma ^LU ; Ehinger, Anna ^LU ; Vallon-Christersson, Johan ^LU and Borg, Åke ^LU , et al. (2021) In Breast cancer research : BCR 23(1).
- Contribution to journal › Article
Mark A gene expression-based single sample predictor of lung adenocarcinoma molecular subtype and prognosis
Liljedahl, Helena ^LU ; Karlsson, Anna ^LU ; Oskarsdottir, Gudrun N. ^LU ; Salomonsson, Annette ^LU ; Brunnström, Hans ^LU ; Erlingsdottir, Gigja ; Jönsson, Mats ^LU ; Isaksson, Sofi ^LU ; Arbajian, Elsa ^LU and Ortiz-Villalón, Cristian , et al. (2021) In International Journal of Cancer 148(1). p.238-251
- Contribution to journal › Article
Mark Pan-cancer application of a lung-adenocarcinoma-derived gene-expression-based prognostic predictor
Nacer, Deborah F. ^LU ; Liljedahl, Helena ^LU ; Karlsson, Anna F ^LU ; Lindgren, David ^LU and Staaf, Johan ^LU (2021) In Briefings in Bioinformatics 22(6).
- Contribution to journal › Article
Mark An Open Source, Automated Tumor Infiltrating Lymphocyte Algorithm for Prognosis in Triple-Negative Breast Cancer
Bai, Yalai ; Cole, Kimberly ; Martinez-morilla, Sandra ; Ahmed, Fahad Shabbir ; Zugazagoitia, Jon ; Staaf, Johan ^LU ; Bosch-Campos, Ana ^LU ; Ehinger, Anna ^LU ; Niméus, Emma ^LU and Hartman, Johan , et al. (2021) In Clinical Cancer Research 27(20). p.5557-5565
- Contribution to journal › Article

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