Nikolay Oskolkov

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2025
Mark Improving taxonomic inference from ancient environmental metagenomes by masking microbial-like regions in reference genomes
Oskolkov, Nikolay ^LU ; Jin, Chenyu ; López Clinton, Samantha ; Guinet, Benjamin ; Wijnands, Flore ; Johnson, Ernst ; Kutschera, Verena E. ; Kinsella, Cormac M. ; Heintzman, Peter D. and Van der Valk, Tom (2025) In GigaScience 14.
- Contribution to journal › Article
2024
Mark Temporal dynamics of woolly mammoth genome erosion prior to extinction
Dehasque, Marianne ; Morales, Hernán E ^LU ; Díez-Del-Molino, David ; Pečnerová, Patrícia ^LU ; Chacón-Duque, J Camilo ; Kanellidou, Foteini ; Muller, Héloïse ; Plotnikov, Valerii ; Protopopov, Albert and Tikhonov, Alexei , et al. (2024) In Cell 187(14). p.13-3540
- Contribution to journal › Article
Mark Identification of microbial pathogens in Neolithic Scandinavian humans
Bergfeldt, Nora ; Kırdök, Emrah ; Oskolkov, Nikolay ^LU ; Mirabello, Claudio ; Unneberg, Per ; Malmström, Helena ; Fraser, Magdalena ; Sanchez-Quinto, Federico ; Jorgensen, Roger and Skar, Birgitte , et al. (2024) In Scientific Reports 14.
- Contribution to journal › Article
Mark Epigenetic modulators link mitochondrial redox homeostasis to cardiac function in a sex-dependent manner
ElBeck, Zaher ; Hossain, Mohammad Bakhtiar ; Siga, Humam ; Oskolkov, Nikolay ^LU ; Karlsson, Fredrik ; Lindgren, Julia ; Walentinsson, Anna ; Koppenhöfer, Dominique ; Jarvis, Rebecca and Bürli, Roland , et al. (2024) In Nature Communications 15.
- Contribution to journal › Article
Mark Exploring different methodological approaches to unlock paleobiodiversity in peat profiles using ancient DNA
Fracasso, Ilaria ; Zaccone, Claudio ; Oskolkov, Nikolay ^LU ; Da Ros, Luca ; Dinella, Anna ; Belelli Marchesini, Luca ; Buzzini, Pietro ; Sannino, Ciro ; Turchetti, Benedetta and Cesco, Stefano , et al. (2024) In Science of the Total Environment 908.
- Contribution to journal › Article
Mark Predicting type 2 diabetes via machine learning integration of multiple omics from human pancreatic islets
Rönn, Tina ^LU ; Perfilyev, Alexander ^LU ; Oskolkov, Nikolay ^LU and Ling, Charlotte ^LU (2024) In Scientific Reports 14(1).
- Contribution to journal › Article
Mark Facilitating accessible, rapid, and appropriate processing of ancient metagenomic data with AMDirT
Borry, Maxime ; Forsythe, Adrian ; Andrades Valtueña, Aida ; Hübner, Alexander ; Ibrahim, Anan ; Quagliariello, Andrea ; White, Anna E. ; Kocher, Arthur ; Vågene‬, Åshild J. and Bartholdy, Bjørn Peare , et al. (2024) In F1000Research 12.
- Contribution to journal › Article
Mark Unraveling the ancient fungal DNA from the Iceman gut
Oskolkov, Nikolay ^LU ; Sandionigi, Anna ; Götherström, Anders ; Canini, Fabiana ; Turchetti, Benedetta ; Zucconi, Laura ; Mimmo, Tanja ; Buzzini, Pietro and Borruso, Luigimaria (2024) In BMC Genomics 25.
- Contribution to journal › Article
2023
Mark Historical RNA expression profiles from the extinct Tasmanian tiger
Mármol-Sánchez, Emilio ; Fromm, Bastian ; Oskolkov, Nikolay ^LU ; Pochon, Zoé ; Kalogeropoulos, Panagiotis ; Eriksson, Eli ; Biryukova, Inna ; Sekar, Vaishnovi ; Ersmark, Erik and Andersson, Björn , et al. (2023) In Genome Research 33(8). p.1299-1316
- Contribution to journal › Article
Mark The microbial biodiversity at the archeological site of Tel Megiddo (Israel)
Zhang, Yali ; Ruff, S. Emil ; Oskolkov, Nikolay ^LU ; Tierney, Braden T. ; Ryon, Krista ; Danko, David ; Mason, Christopher E. and Elhaik, Eran ^LU (2023) In Frontiers in Microbiology 14.
- Contribution to journal › Article

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