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- 2017
-
Mark
A somatic-mutational process recurrently duplicates germline susceptibility loci and tissue-specific super-enhancers in breast cancers
Glodzik, Dominik LU ; Morganella, Sandro ; Davies, Helen R. ; Simpson, Peter T ; Li, Yilong ; Zou, Xueqing ; Diez-Perez, Javier ; Staaf, Johan LU
; Alexandrov, Ludmil B.
and Smid, Marcel
, et al.
(2017)
In Nature Genetics
49(3).
p.341-348
- Contribution to journal › Article
- 2016
-
Mark
Prognostic and chemotherapy predictive value of gene-expression phenotypes in primary lung adenocarcinoma.
Ringnér, Markus LU
; Jönsson, Göran B
LU
and Staaf, Johan
LU
(2016)
In Clinical Cancer Research
22(1).
p.218-229
- Contribution to journal › Article
-
Mark
Consensus of gene expression phenotypes and prognostic risk predictors in primary lung adenocarcinoma
- Contribution to journal › Article
-
Mark
Consensus of Melanoma Gene Expression Subtypes Converges on Biological Entities
Lauss, Martin LU ; Nsengimana, Jeremie ; Staaf, Johan LU
; Newton-Bishop, Julia
and Jönsson, Göran
LU
(2016)
In Journal of Investigative Dermatology
136(12).
p.2502-2505
- Contribution to journal › Letter
-
Mark
Spatial Transcriptomics. Digital Pathology to Investigate Intratumor Heterogeneity in Breast Cancer.
Salmén, Fredrik ; Vickovic, Sanja ; Jemt, Anders ; Bergenstråhle, Joseph ; Fernandez, José ; Mollbrink, Annelie ; Vallon-Christersson, Johan LU
; Staaf, Johan
LU
; Häkkinen, Jari
LU
and Ehinger, Anna
LU
, et al.
(2016)
AGBT Advances in Genome Biology and Technology meeting.
- Contribution to conference › Poster
-
Mark
An integrated genomics analysis of epigenetic subtypes in human breast tumors links DNA methylation patterns to chromatin states in normal mammary cells.
Holm, Karolina LU ; Staaf, Johan LU
; Lauss, Martin
LU
; Aine, Mattias
LU
; Lindgren, David
LU
; Bendahl, Pär-Ola
LU
; Vallon-Christersson, Johan
LU
; Barkardottir, Rosa Bjork
; Höglund, Mattias
LU
and Borg, Åke
LU
, et al.
(2016)
In Breast Cancer Research
18(1).
- Contribution to journal › Article
-
Mark
Landscape of somatic mutations in 560 breast cancer whole-genome sequences
Nik-Zainal, Serena ; Davies, Helen ; Staaf, Johan LU
; Ramakrishna, Manasa
; Glodzik, Dominik
; Zou, Xueqing
; Martincorena, Inigo
; Alexandrov, Ludmil B
; Martin, Sancha
and Wedge, David C
, et al.
(2016)
In Nature
534(7605).
p.47-54
- Contribution to journal › Article
-
Mark
The topography of mutational processes in breast cancer genomes
Morganella, Sandro ; Alexandrov, Ludmil B. ; Glodzik, Dominik ; Zou, Xueqing ; Davies, Helen ; Staaf, Johan LU
; Sieuwerts, Anieta M.
; Brinkman, Arie B.
; Martin, Sancha
and Ramakrishna, Manasa
, et al.
(2016)
In Nature Communications
7.
- Contribution to journal › Article
-
Mark
Breast cancer genome and transcriptome integration implicates specific mutational signatures with immune cell infiltration
Smid, Marcel ; Rodríguez-González, F Germán ; Sieuwerts, Anieta M ; Salgado, Roberto ; Prager-Van der Smissen, Wendy J C ; Vlugt-Daane, Michelle van der ; van Galen, Anne ; Nik-Zainal, Serena ; Staaf, Johan LU
and Brinkman, Arie B
, et al.
(2016)
In Nature Communications
7.
- Contribution to journal › Article
- 2015
-
Mark
Genome-Wide DNA Methylation Analysis in Melanoma Reveals the Importance of CpG Methylation in MITF Regulation.
Lauss, Martin LU ; Haq, Rizwan ; Cirenajwis, Helena LU ; Phung, Bengt LU ; Harbst, Katja LU
; Staaf, Johan
LU
; Rosengren, Frida
LU
; Holm, Karolina
LU
; Aine, Mattias
LU
and Jirström, Karin
LU
, et al.
(2015)
In Journal of Investigative Dermatology
135(7).
p.1820-1828
- Contribution to journal › Article