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- 2020
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Mark
Analysis of DNA methylation patterns in the tumor immune microenvironment of metastatic melanoma
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- Contribution to journal › Article
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Pan-cancer analysis of whole genomes
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- Contribution to journal › Article
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Mark
Sex differences in oncogenic mutational processes
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- Contribution to journal › Article
- 2019
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Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation
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- Contribution to journal › Article
- 2017
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Mark
Mutational and putative neoantigen load predict clinical benefit of adoptive T cell therapy in melanoma
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- Contribution to journal › Article
- 2016
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Mark
Prognostic and chemotherapy predictive value of gene-expression phenotypes in primary lung adenocarcinoma.
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- Contribution to journal › Article
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Breast cancer genome and transcriptome integration implicates specific mutational signatures with immune cell infiltration
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- Contribution to journal › Article
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An integrated genomics analysis of epigenetic subtypes in human breast tumors links DNA methylation patterns to chromatin states in normal mammary cells.
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- Contribution to journal › Article
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Landscape of somatic mutations in 560 breast cancer whole-genome sequences
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- Contribution to journal › Article
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Consensus of gene expression phenotypes and prognostic risk predictors in primary lung adenocarcinoma
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- Contribution to journal › Article
- 2015
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DNA methylation and histone modifications regulate SOX11 expression in lymphoid and solid cancer cells.
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- Contribution to journal › Article
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Integrative epigenomic analysis of differential DNA methylation in urothelial carcinoma.
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- Contribution to journal › Article
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Molecular stratification of metastatic melanoma using gene expression profiling: prediction of survival outcome and benefit from molecular targeted therapy.
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- Contribution to journal › Article
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DNA methylation subgroups in melanoma are associated with proliferative and immunological processes.
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- Contribution to journal › Article
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Mark
Genome-Wide DNA Methylation Analysis in Melanoma Reveals the Importance of CpG Methylation in MITF Regulation.
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- Contribution to journal › Article
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Mark
Making breast cancer molecular subtypes robust?
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- Contribution to journal › Debate/Note/Editorial
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MicroRNA-200c-141 and ∆Np63 are required for breast epithelial differentiation and branching morphogenesis.
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- Contribution to journal › Article
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Mark
Genome methylation patterns in male breast cancer - Identification of an epitype with hypermethylation of polycomb target genes.
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- Contribution to journal › Article
- 2014
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Mark
Primary Melanoma Tumors from CDKN2A Mutation Carriers do not Belong to a Distinct Molecular Subclass.
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- Contribution to journal › Article
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Mark
Genomic and transcriptional alterations in lung adenocarcinoma in relation to smoking history.
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- Contribution to journal › Article
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Mark
Genome-wide DNA methylation analysis of lung carcinoma reveals one neuroendocrine and four adenocarcinoma epitypes associated with patient outcome.
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- Contribution to journal › Article
- 2013
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Mark
The Landscape of Candidate Driver Genes Differs between Male and Female Breast Cancer.
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- Contribution to journal › Article
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Mark
Monitoring of technical variation in quantitative high-throughput datasets.
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- Contribution to journal › Article
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Mark
High expression of ZNF703 independent of amplification indicates worse prognosis in patients with luminal B breast cancer
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- Contribution to journal › Article
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Mark
Exosomes reflect the hypoxic status of glioma cells and mediate hypoxia-dependent activation of vascular cells during tumor development.
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- Contribution to journal › Article
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Mark
Nonfamilial breast cancer subtypes.
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- Contribution to journal › Scientific review
- 2012
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Mark
A Molecular Taxonomy for Urothelial Carcinoma.
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- Contribution to journal › Article
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Mark
Gene expression profiling of primary male breast cancers reveals two unique subgroups and identifies N-acetyltransferase-1 (NAT1) as a novel prognostic biomarker
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- Contribution to journal › Article
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Mark
The gene expression landscape of breast cancer is shaped by tumor protein p53 status and epithelial-mesenchymal transition
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- Contribution to journal › Article
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Mark
DNA methylation analyses of urothelial carcinoma reveal distinct epigenetic subtypes and an association between gene copy number and methylation status.
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- Contribution to journal › Article
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Mark
Characterisation of amplification patterns and target genes at chromosome 11q13 in CCND1-amplified sporadic and familial breast tumours.
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- Contribution to journal › Article
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Mark
Molecular profiling reveals low- and high-grade forms of primary melanoma
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- Contribution to journal › Article
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Mark
The retinoblastoma gene undergoes rearrangements in BRCA1-deficient basal-like breast cancer.
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- Contribution to journal › Article
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Mark
Global H3K27 trimethylation and EZH2 abundance in breast tumor subtypes.
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- Contribution to journal › Article
- 2011
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Mark
Endothelial Induced EMT in Breast Epithelial Cells with Stem Cell Properties
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- Contribution to journal › Article
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Mark
CD44 isoforms are heterogeneously expressed in breast cancer and correlate with tumor subtypes and cancer stem cell markers.
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- Contribution to journal › Article
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Mark
High-resolution genomic profiling of male breast cancer reveals differences hidden behind the similarities with female breast cancer
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- Contribution to journal › Article
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Mark
Landscape of somatic allelic imbalances and copy number alterations in HER2-amplified breast cancer
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- Contribution to journal › Article
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Mark
GOBO: Gene Expression-Based Outcome for Breast Cancer Online.
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- Contribution to journal › Article
- 2010
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Mark
An integrative genomics screen uncovers ncRNA T-UCR functions in neuroblastoma tumours
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- Contribution to journal › Article
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Mark
Molecular subtypes of breast cancer are associated with characteristic DNA methylation patterns
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- Contribution to journal › Article
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Mark
High-resolution genomic and expression analyses of copy number alterations in HER2-amplified breast cancer
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- Contribution to journal › Article
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Mark
Genomic subtypes of breast cancer identified by array-comparative genomic hybridization display distinct molecular and clinical characteristics
(
- Contribution to journal › Article
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Mark
Genome-wide transcription factor binding site/promoter databases for the analysis of gene sets and co-occurrence of transcription factor binding motifs.
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- Contribution to journal › Article
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Mark
Multiple metastases from cutaneous malignant melanoma patients may display heterogeneous genomic and epigenomic patterns.
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- Contribution to journal › Article
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Mark
Gene Expression Profiling-Based Identification of Molecular Subtypes in Stage IV Melanomas with Different Clinical Outcome.
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- Contribution to journal › Article
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Mark
Identification of Subtypes in Human Epidermal Growth Factor Receptor 2-Positive Breast Cancer Reveals a Gene Signature Prognostic of Outcome.
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- Contribution to journal › Article
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Mark
Prediction of Stage, Grade, and Survival in Bladder Cancer Using Genome Wide Expression Data: A Validation Study.
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- Contribution to journal › Article
- 2008
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Mark
Segmentation-based detection of allelic imbalance and loss-of-heterozygosity in cancer cells using whole genome SNP arrays
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- Contribution to journal › Article
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Mark
The CD44(+)/CD24(-) phenotype is enriched in basal-like breast tumors
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- Contribution to journal › Article
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Mark
Tiling array-CGH for the assessment of genomic similarities among synchronous unilateral and bilateral invasive breast cancer tumor pairs.
(
- Contribution to journal › Article
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Mark
What is principal component analysis?
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- Contribution to journal › Article
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Mark
Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios.
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- Contribution to journal › Article
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Mark
High Myc pathway activity and low stage of neuronal differentiation associate with poor outcome in neuroblastoma.
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- Contribution to journal › Article
- 2007
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Mark
Poor prognosis in carcinoma is associated with a gene expression signature of aberrant PTEN tumor suppressor pathway activity
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- Contribution to journal › Article
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Mark
Genomic profiling of malignant melanoma using tiling-resolution arrayCGH.
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- Contribution to journal › Article
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Mark
Revealing signaling pathway deregulation by using gene expression signatures and regulatory motif analysis
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- Contribution to journal › Article
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Mark
Normalization of array-CGH data: influence of copy number imbalances
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- Contribution to journal › Article
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Mark
High-resolution genomic profiles of breast cancer cell lines assessed by tiling BAC array comparative genomic hybridization.
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- Contribution to journal › Article
- 2005
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Mark
Distinct genomic profiles in hereditary breast tumors identified by array-based comparative genomic hybridization.
(
- Contribution to journal › Article
- 2004
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Mark
ACID: a database for microarray clone information
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- Contribution to journal › Article
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Mark
Predicting continuous values of prognostic markers in breast cancer from microarray gene expression profiles.
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- Contribution to journal › Article
- 2003
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Mark
Expression profiling to predict outcome in breast cancer: the influence of sample selection
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- Contribution to journal › Article
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Mark
Molecular classification of familial non-BRCA1/BRCA2 breast cancer
(
- Contribution to journal › Article
- 2002
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Mark
Gene expression in inherited breast cancer
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- Contribution to journal › Scientific review
- 2001
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Mark
Estrogen receptor status in breast cancer is associated with remarkably distinct gene expression patterns
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- Contribution to journal › Article
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Mark
Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks
(
- Contribution to journal › Article