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- 2024
-
Mark
Gene fusions and microRNAs in cancer
2024) In Lund University, Faculty of Medicine Doctoral Dissertation Series(
- Thesis › Doctoral thesis (compilation)
-
Mark
A Federated Database for Obesity Research : An IMI-SOPHIA Study
(
- Contribution to journal › Article
-
Mark
A Bioinformatically Initiated Approach to Evaluate GATA1 Regulatory Regions in Samples with Weak D, Del, or D- Phenotypes Despite Normal RHD Exons
2024) In Transfusion Medicine and Hemotherapy(
- Contribution to journal › Article
-
Mark
Transposable Elements in the Healthy and Diseased Human Brain
2024) In Lund University, Faculty of Medicine Doctoral Dissertation Series(
- Thesis › Doctoral thesis (compilation)
- 2023
-
Mark
Early onset ataxia with comorbid myoclonus and epilepsy : A disease spectrum with shared molecular pathways and cortico-thalamo-cerebellar network involvement
(
- Contribution to journal › Article
-
Mark
In vitro clonal multilineage differentiation of distinct murine hematopoietic progenitor populations
(
- Contribution to journal › Article
-
Mark
Answers of big biological data to unsolved diabetes questions - Unveiling causes of impaired β-cell insulin secretion
2023) In Lund University, Faculty of Medicine Doctoral Dissertation Series(
- Thesis › Doctoral thesis (compilation)
-
Mark
The Swedish childhood tumor biobank : systematic collection and molecular characterization of all pediatric CNS and other solid tumors in Sweden
(
- Contribution to journal › Article
-
Mark
Protein Biomarker Signatures in Precision Diagnostics of Cancer
2023) p.487-505(
- Chapter in Book/Report/Conference proceeding › Book chapter
-
Mark
A Novel Predictor for the Analysis and Prediction of Enhancers and Their Strength via Multi-View Features and Deep Forest
(
- Contribution to journal › Article
- 2022
-
Mark
A study of DNA interactive proteins and their origin from thermophilic Siphoviridae phages
2022)(
- Thesis › Doctoral thesis (compilation)
-
Mark
PhosPiR : an automated phosphoproteomic pipeline in R
(
- Contribution to journal › Article
-
Mark
Computational Single-Cell Genomics Methods for Cell State Estimation and their Application to Hematopoietic Systems
2022) In Lund University, Faculty of Medicine Doctoral Dissertation Series(
- Thesis › Doctoral thesis (compilation)
-
Mark
Evolutionary consequences of genomic deletions and insertions in the woolly mammoth genome
(
- Contribution to journal › Article
-
Mark
Upregulated functional gene expression programmes in tumour pericytes mark progression in patients with low-grade glioma
(
- Contribution to journal › Article
-
Mark
Data analysis for discovering the protein profile dynamics of the human ovarian follicular fluid and BRAF mutated metastatic melanoma tissue. : -
2022) In Lund University, Faculty of Medicine Doctoral Dissertation Series(
- Thesis › Doctoral thesis (compilation)
- 2021
-
Mark
Evolution of sex chromosomes in Sylvioidea songbirds
2021)(
- Thesis › Doctoral thesis (compilation)
-
Mark
CellexalVR : A virtual reality platform to visualize and analyze single-cell omics data
(
- Contribution to journal › Article
-
Mark
Functional effects of protein variants
(
- Contribution to journal › Article
-
Mark
FS-GBDT : identification multicancer-risk module via a feature selection algorithm by integrating Fisher score and GBDT
(
- Contribution to journal › Article
-
Mark
Two novel, flavin-dependent halogenases from the bacterial consortia of botryococcus braunii catalyze mono-and dibromination
(
- Contribution to journal › Article
-
Mark
Peptimetric : Quantifying and Visualizing Differences in Peptidomic Data
(
- Contribution to journal › Article
-
Mark
Bioinformatic Analysis of the Wound Peptidome Reveals Potential Biomarkers and Antimicrobial Peptides
(
- Contribution to journal › Article
- 2020
-
Mark
Next-generation epidemiology : the role of high-resolution molecular phenotyping in diabetes research
(
- Contribution to journal › Scientific review
-
Mark
A crowdsourced set of curated structural variants for the human genome
(
- Contribution to journal › Article
-
Mark
The Mutational Landscape of the SCAN-B Real-World Primary Breast Cancer Transcriptome
2020)(
- Working paper/Preprint › Preprint in preprint archive
- 2019
-
Mark
Hunting a Silent Killer. Biomolecular Approaches in Ovarian Cancer
(
- Thesis › Doctoral thesis (compilation)
-
Mark
Mining the Proteome Associated with Rheumatic and Autoimmune Diseases
(
- Contribution to journal › Article
-
Mark
A novel conserved family of Macro-like domains—putative new players in ADP-ribosylation signaling
(
- Contribution to journal › Article
-
Mark
Production and utilisation of prebiotic oligosaccharides : Applied bioinformatics of glycoside hydrolases
2019)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Global network of computational biology communities : ISCB's Regional Student Groups breaking barriers
(
- Contribution to journal › Debate/Note/Editorial
-
Mark
Understanding and improving microbial cell factories through Large Scale Data-approaches
2019)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Bioinformatics resources for microbial research in biological systems
2019) p.45-60(
- Chapter in Book/Report/Conference proceeding › Book chapter
-
Mark
SVCurator: A Crowdsourcing app to visualize evidence of structural variants for the human genome
2019)(
- Working paper/Preprint › Preprint in preprint archive
- 2018
-
Mark
Large Scale Identification of Variant Proteins in Glioma Stem Cells
(
- Contribution to journal › Article
-
Mark
Critical steps for computational inference of the 3′-end of novel alleles of immunoglobulin heavy chain variable genes - illustrated by an allele of IGHV3-7
(
- Contribution to journal › Article
-
Mark
Bioconda: sustainable and comprehensive software distribution for the life sciences
(
- Contribution to journal › Letter
-
Mark
Bioinformatic studies of genetic variation at known, novel and candidate blood group loci
(
- Thesis › Doctoral thesis (compilation)
- 2017
-
Mark
In-depth analysis of protein inference algorithms using multiple search engines and well-defined metrics
(
- Contribution to journal › Article
-
Mark
Bioinformatic approaches to gene expression in leukemia. Networks and deconvolution
2017)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Dimension Reduction and Signal Decomposition for Genotype–Phenotype Relations
2017)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Biopython Project Update 2017
2017) 18th Bioinformatics Open Source Conference, 2017(
- Contribution to conference › Other
-
Mark
Merging clinical chemistry biomarker data with a COPD database - building a clinical infrastructure for proteomic studies
(
- Contribution to journal › Article
-
Mark
Parallel antibody germline gene and haplotype analyses support the validity of immunoglobulin germline gene inference and discovery
(
- Contribution to journal › Article
-
Mark
Analysis of bacterial surface interactions with mass spectrometry-based proteomics
(
- Chapter in Book/Report/Conference proceeding › Book chapter
-
Mark
Testing genotyping strategies for ultra-deep sequencing of a co-amplifying gene family : MHC class I in a passerine bird
(
- Contribution to journal › Article
-
Mark
Bioconda: A sustainable and comprehensive software distribution for the life sciences
2017)(
- Working paper/Preprint › Preprint in preprint archive
- 2016
-
Mark
Do Genetic Factors Modify the Relationship Between Obesity and Hypertriglyceridemia? : Findings From the GLACIER and the MDC Studies
(
- Contribution to journal › Article
-
Mark
Tools and pipelines for interpreting the impacts of genetic variants
2016)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Quantitative analysis of mass spectrometry proteomics data : Software for improved life science
2016)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Biopython Project Update 2016
2016) Bioinformatics Open Source Conference, 2016(
- Contribution to conference › Other
-
Mark
Integrator of stress responses calmodulin binding transcription activator 1 (Camta1) Regulates miR-212/miR-132 Expression and insulin secretion
(
- Contribution to journal › Article
-
Mark
Yeast Pathway Kit : A Method for Metabolic Pathway Assembly with Automatically Simulated Executable Documentation
(
- Contribution to journal › Article
-
Mark
Genome-wide analysis of the DNA methylation landscape in human tissues
2016)(
- Thesis › Doctoral thesis (compilation)
-
Mark
FibSim, a web application to refine fibrillar macromolecular models : Masters thesis in Bioinformatics
2016)(
- Thesis › Master's thesis
-
Mark
Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney function
(
- Contribution to journal › Article
- 2015
-
Mark
MetCap: a bioinformatics probe design pipeline for large-scale targeted metagenomics
(
- Contribution to journal › Article
-
Mark
Systematic Identification of Single Amino Acid Variants in Glioma Stem-Cell-Derived Chromosome 19 Proteins
(
- Contribution to journal › Article
-
Mark
In vitro Transcription/Translation System: A Versatile Tool in the Search for Missing Proteins
(
- Contribution to journal › Article
-
Mark
Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project
(
- Contribution to journal › Article
-
Mark
Representation of selected-reaction monitoring data in the mzQuantML data standard
(
- Contribution to journal › Article
-
Mark
Gene microarray data analysis using parallel point-symmetry-based clustering
(
- Contribution to journal › Article
-
Mark
Development of Computational Methods for Cancer Research: Strategies for closing the feedback loop in omics workflows
2015)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Navigating the labyrinth : A guide to sequence-based, community ecology of arbuscular mycorrhizal fungi
(
- Contribution to journal › Article
- 2014
-
Mark
Performance of Protein Disorder Prediction Programs on Amino Acid Substitutions
(
- Contribution to journal › Scientific review
-
Mark
Incorporation of gene exchangeabilities improves the reproducibility of gene set rankings
(
- Contribution to journal › Article
-
Mark
Integrated Chromosome 19 Transcriptomic and Proteomic Datasets Derived from Six Glioma-Derived Cancer Stem Cell Lines
(
- Contribution to journal › Article
- 2013
-
Mark
Establishing a Southern Swedish Malignant Melanoma OMICS and Biobank Clinical Capability
(
- Contribution to journal › Article
-
Mark
Chromosome 19 Annotations with Disease Speciation - A First Report from the Global Research Consortium
(
- Contribution to journal › Article
- 2012
-
Mark
Viewpoints in Clinical Proteomics - when will proteomics deliver clinically useful information?
(
- Contribution to journal › Article
- 2011
-
Mark
Statistically Guided Visualization and Exploratory Analysis of Omics Data
2011)(
- Thesis › Doctoral thesis (compilation)
- 2010
-
Mark
A data mining approach to dinoflagellate clustering according to sterol composition: correlations with evolutionary history
(
- Contribution to journal › Article
- 2009
-
Mark
Proteomics Data Collection-5th ProDaC Workshop
(
- Contribution to journal › Article
-
Mark
Proteomics data collection--4th ProDaC workshop 15 August 2008, Amsterdam, The Netherlands
(
- Contribution to journal › Article
- 2008
-
Mark
Compression algorithm for pre-simulated Monte Carlo p-value functions: Application to the ontological analysis of microarray studies
(
- Contribution to journal › Article
-
Mark
Proteomics Data Collection - 3rd ProDaC Workshop April 22nd 2008, Toledo, Spain
(
- Contribution to journal › Article
-
Mark
Applied statistics and the Indianness of Indian data
(
- Contribution to journal › Article
- 2007
-
Mark
Bioinformatic approaches for modeling the substrate specificity of HIV-1 protease: an overview
(
- Contribution to journal › Scientific review
-
Mark
Insights into structure and dynamics of the AAA+ motor of magnesium chelatase
2007)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Gene Regulatory Networks: Dynamics and Stability
2007)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Classification and Computational Methods in Gene Expression Data Analysis
2007)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Computational Prediction Models for Proteolytic Cleavage and Epitope Identification
2007)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Proteome Profiling of Strawberry and Characterization of a Bet v 1-Homologous Allergen
2007)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Insulin Polymorphism Crystallographic Characterization of Insulin Microcrystals
2007)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Statistical and Functional Analysis of Genomic and Proteomic Data
2007)(
- Thesis › Doctoral thesis (compilation)
- 2006
-
Mark
Dynamics in Random Boolean Networks
2006)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Proteome
(
- Chapter in Book/Report/Conference proceeding › Entry for encyclopaedia/dictionary
- 2005
-
Mark
Measuring genome conservation across taxa: divided strains and united kingdoms
(
- Contribution to journal › Article
-
Mark
New methods for protein structure threading and domain identification
2005)(
- Thesis › Doctoral thesis (compilation)
- 2004
-
Mark
A strategy for identifying putative causes of gene expression variation in human cancers
(
- Contribution to journal › Article
-
Mark
Probalistic Methods In Genomic Data Analysis
2004)(
- Thesis › Doctoral thesis (compilation)
- 2003
-
Mark
Description and analysis of two internet-based databases of insect pathogens: EDWIP and VIDIL
(
- Contribution to journal › Article
-
Mark
Function via structure in vivo and in modeling
2003)(
- Thesis › Doctoral thesis (compilation)
- 2002
-
Mark
Analyzing array data using supervised methods
(
- Contribution to journal › Scientific review
-
Mark
Helicobacter pylori cell surface interactions with glycosaminoglycans. Identification and characterisation of proteins binding to heparin/heparan sulphate.
2002)(
- Thesis › Doctoral thesis (compilation)
- 2001
-
Mark
Genomic Diversity and Evolution of Parasitism in Nematode-trapping Fungi
2001)(
- Thesis › Doctoral thesis (compilation)
-
Mark
Bioinformatics in proteomics
(
- Contribution to journal › Scientific review