Infection Medicine Proteomics

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2021
Mark PCprophet : a framework for protein complex prediction and differential analysis using proteomic data
Fossati, Andrea ; Li, Chen ; Uliana, Federico ; Wendt, Fabian ; Frommelt, Fabian ; Sykacek, Peter ; Heusel, Moritz ^LU ; Hallal, Mahmoud ; Bludau, Isabell and Capraz, Tümay , et al. (2021) In Nature Methods 18(5). p.520-527
- Contribution to journal › Article
Mark Cheetah-MS: a web server to model protein complexes using tandem cross-linking mass spectrometry data
Khakzad, Hamed ; Happonen, Lotta ^LU ; Malmström, Johan ^LU and Malmström, Lars ^LU (2021) In Bioinformatics 37(24). p.4871-4872
- Contribution to journal › Article
Mark Streptococcus pyogenes Forms Serotype- and Local Environment-Dependent Interspecies Protein Complexes
Chowdhury, Sounak ^LU ; Khakzad, Hamed ; Bergdahl, Gizem Ertürk ^LU ; Lood, Rolf ^LU ; Ekstrom, Simon ^LU ; Linke, Dirk ; Malmström, Lars ^LU ; Happonen, Lotta ^LU and Malmström, Johan ^LU (2021) In mSystems 6(5). p.1-19
- Contribution to journal › Article
Mark Targeted selected reaction monitoring verifies histology specific peptide signatures in epithelial ovarian cancer
Liljedahl, Leena ^LU ; Malmström, Johan ^LU ; Kristjansdottir, Björg ; Waldemarson, Sofia ^LU and Sundfeldt, Karin (2021) In Cancers 13(22).
- Contribution to journal › Article
Mark Extending the Proteomic Characterization of Candida albicans Exposed to Stress and Apoptotic Inducers through Data-Independent Acquisition Mass Spectrometry
Amador-García, Ahinara ; Zapico, Inés ; Borrajo, Ana ; Malmström, Johan ^LU ; Monteoliva, Lucía and Gil, Concha (2021) In mSystems 6(5).
- Contribution to journal › Article
Mark Systematic detection of functional proteoform groups from bottom-up proteomic datasets
Bludau, Isabell ; Frank, Max ; Dörig, Christian ; Cai, Yujia ; Heusel, Moritz ^LU ; Rosenberger, George ; Picotti, Paola ; Collins, Ben C. ; Röst, Hannes and Aebersold, Ruedi (2021) In Nature Communications 12(1).
- Contribution to journal › Article
Mark Proteome profiling of recombinant DNase therapy in reducing NETs and aiding recovery in COVID-19 patients
Fisher, Jane ^LU ; Mohanty, Tirthankar ^LU ; Karlsson, Christofer ^LU ; Khademi, S M Hossein ^LU ; Malmström, Erik ^LU ; Frigyesi, Attila ^LU ; Nordenfelt, Pontus ^LU ; Malmstrom, Johan ^LU and Linder, Adam ^LU (2021) In Molecular and Cellular Proteomics 20.
- Contribution to journal › Article
Mark Protein signatures of remodeled airways in transplanted lungs with Bronchiolitis Obliterans Syndrome obtained using laser capture microdissection
Müller, Catharina ^LU ; Rosmark, Oskar ^LU ; Åhrman, Emma ^LU ; Brunnström, Hans ^LU ; Wassilew, Katharina ; Nybom, Annika ^LU ; Michaliková, Barbora ^LU ; Larsson, Hillevi ^LU ; Eriksson, Leif T ^LU and Schultz, Hans Henrik , et al. (2021) In American Journal of Pathology 191(8). p.1398-1411
- Contribution to journal › Article
Mark Streptococcal protein SIC activates monocytes and induces inflammation
Neumann, Ariane ^LU ; Happonen, Lotta ^LU ; Karlsson, Christofer ^LU ; Bahnan, Wael ^LU ; Frick, Inga Maria ^LU and Björck, Lars ^LU (2021) In iScience 24(4).
- Contribution to journal › Article
Mark Quantitative proteomic analysis of human peripheral nerves from subjects with type 2 diabetes
Ising, Erik ^LU ; Åhrman, Emma ^LU ; Thomsen, Niels O B ^LU ; Eriksson, Karl-Fredrik ^LU ; Malmström, Johan ^LU and Dahlin, Lars B ^LU (2021) In Diabetic Medicine: A journal of the British Diabetic Association 38(11).
- Contribution to journal › Article

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