Johan Staaf
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- 2016
-
Mark
Breast cancer genome and transcriptome integration implicates specific mutational signatures with immune cell infiltration
Smid, Marcel ; Rodríguez-González, F Germán ; Sieuwerts, Anieta M ; Salgado, Roberto ; Prager-Van der Smissen, Wendy J C ; Vlugt-Daane, Michelle van der ; van Galen, Anne ; Nik-Zainal, Serena ; Staaf, Johan LU
and Brinkman, Arie B
, et al.
(2016)
In Nature Communications
7.
- Contribution to journal › Article
-
Mark
Consensus of Melanoma Gene Expression Subtypes Converges on Biological Entities
Lauss, Martin LU ; Nsengimana, Jeremie ; Staaf, Johan LU
; Newton-Bishop, Julia
and Jönsson, Göran
LU
(2016)
In Journal of Investigative Dermatology
136(12).
p.2502-2505
- Contribution to journal › Letter
-
Mark
Spatial Transcriptomics. Digital Pathology to Investigate Intratumor Heterogeneity in Breast Cancer.
Salmén, Fredrik ; Vickovic, Sanja ; Jemt, Anders ; Bergenstråhle, Joseph ; Fernandez, José ; Mollbrink, Annelie ; Vallon-Christersson, Johan LU
; Staaf, Johan
LU
; Häkkinen, Jari
LU
and Ehinger, Anna
LU
, et al.
(2016)
AGBT Advances in Genome Biology and Technology meeting.
- Contribution to conference › Poster
- 2015
-
Mark
DNA methylation subgroups in melanoma are associated with proliferative and immunological processes.
Lauss, Martin LU ; Ringnér, Markus LU
; Karlsson, Anna F
LU
; Harbst, Katja
LU
; Busch, Christian
; Geisler, Jürgen
; Lønning, Per Eystein
; Staaf, Johan
LU
and Jönsson, Göran B
LU
(2015)
In BMC Medical Genomics
8(1).
- Contribution to journal › Article
-
Mark
Mutational and gene fusion analyses of primary large cell and large cell neuroendocrine lung cancer.
Karlsson, Anna K LU ; Brunnström, Hans LU
; Ericson Lindquist, Kajsa
LU
; Jirström, Karin
LU
; Jönsson, Mats
LU
; Rosengren, Frida
LU
; Reuterswärd, Christel
LU
; Cirenajwis, Helena
LU
; Borg, Åke
LU
and Jönsson, Per
LU
, et al.
(2015)
In Oncotarget
6(26).
p.22028-22037
- Contribution to journal › Article
-
Mark
Genome-Wide DNA Methylation Analysis in Melanoma Reveals the Importance of CpG Methylation in MITF Regulation.
Lauss, Martin LU ; Haq, Rizwan ; Cirenajwis, Helena LU ; Phung, Bengt LU ; Harbst, Katja LU
; Staaf, Johan
LU
; Rosengren, Frida
LU
; Holm, Karolina
LU
; Aine, Mattias
LU
and Jirström, Karin
LU
, et al.
(2015)
In Journal of Investigative Dermatology
135(7).
p.1820-1828
- Contribution to journal › Article
-
Mark
Making breast cancer molecular subtypes robust?
Staaf, Johan LU
and Ringnér, Markus
LU
(2015)
In Journal of the National Cancer Institute
107(1).
p.386-386
- Contribution to journal › Debate/Note/Editorial
-
Mark
Genome methylation patterns in male breast cancer - Identification of an epitype with hypermethylation of polycomb target genes.
Johansson, Ida LU ; Lauss, Martin LU ; Holm, Karolina LU ; Staaf, Johan LU
; Nilsson, Cecilia
; Fjällskog, Marie-Louise
; Ringnér, Markus
LU
and Hedenfalk, Ingrid
LU
(2015)
In Molecular Oncology
9(8).
p.1565-1579
- Contribution to journal › Article
-
Mark
Loss of CITED1, an MITF regulator, drives a phenotype switch in vitro and can predict clinical outcome in primary melanoma tumours.
Howlin, Jillian LU ; Cirenajwis, Helena LU ; Lettiero, Barbara LU ; Staaf, Johan LU
; Lauss, Martin
LU
; Saal, Lao
LU
; Borg, Ke
; Gruvberger, Sofia
LU
and Jönsson, Göran B
LU
(2015)
In PeerJ
3.
- Contribution to journal › Article
-
Mark
Molecular stratification of metastatic melanoma using gene expression profiling: prediction of survival outcome and benefit from molecular targeted therapy.
Cirenajwis, Helena LU ; Ekedahl, Henrik LU ; Lauss, Martin LU ; Harbst, Katja LU
; Carneiro, Ana
LU
; Enoksson, Jens
LU
; Rosengren, Frida
LU
; Werner Hartman, Linda
LU
; Törngren, Therese
LU
and Kvist, Anders
LU
, et al.
(2015)
In Oncotarget
6(14).
p.12297-12309
- Contribution to journal › Article