Markus Ringnér
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- 2024
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Mark
PARKIN is not required to sustain OXPHOS function in adult mammalian tissues
(
- Contribution to journal › Article
- 2022
-
Mark
Environmentally induced DNA methylation is inherited across generations in an aquatic keystone species
(
- Contribution to journal › Article
-
Mark
PRC2-mediated repression is essential to maintain identity and function of differentiated dopaminergic and serotonergic neurons
(
- Contribution to journal › Article
- 2021
-
Mark
Mitochondrial dysfunction in adult midbrain dopamine neurons triggers an early immune response
(
- Contribution to journal › Article
-
Mark
Mutational patterns and clonal evolution from diagnosis to relapse in pediatric acute lymphoblastic leukemia
(
- Contribution to journal › Article
-
Mark
Tissue-specific transcriptional imprinting and heterogeneity in human innate lymphoid cells revealed by full-length single-cell RNA-sequencing
(
- Contribution to journal › Article
- 2020
-
Mark
Pan-cancer analysis of whole genomes
(
- Contribution to journal › Article
-
Mark
Analysis of DNA methylation patterns in the tumor immune microenvironment of metastatic melanoma
(
- Contribution to journal › Article
-
Mark
Sex differences in oncogenic mutational processes
(
- Contribution to journal › Article
- 2019
-
Mark
Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation
(
- Contribution to journal › Article
- 2018
-
Mark
Spatially and functionally distinct subclasses of breast cancer-associated fibroblasts revealed by single cell RNA sequencing
(
- Contribution to journal › Article
-
Mark
A comprehensive map coupling histone modifications with gene regulation in adult dopaminergic and serotonergic neurons
(
- Contribution to journal › Article
- 2017
-
Mark
Mutational and putative neoantigen load predict clinical benefit of adoptive T cell therapy in melanoma
(
- Contribution to journal › Article
- 2016
-
Mark
Prognostic and chemotherapy predictive value of gene-expression phenotypes in primary lung adenocarcinoma.
(
- Contribution to journal › Article
-
Mark
An integrated genomics analysis of epigenetic subtypes in human breast tumors links DNA methylation patterns to chromatin states in normal mammary cells.
(
- Contribution to journal › Article
-
Mark
Breast cancer genome and transcriptome integration implicates specific mutational signatures with immune cell infiltration
(
- Contribution to journal › Article
-
Mark
Landscape of somatic mutations in 560 breast cancer whole-genome sequences
(
- Contribution to journal › Article
-
Mark
Consensus of gene expression phenotypes and prognostic risk predictors in primary lung adenocarcinoma
(
- Contribution to journal › Article
- 2015
-
Mark
DNA methylation subgroups in melanoma are associated with proliferative and immunological processes.
(
- Contribution to journal › Article
-
Mark
Molecular stratification of metastatic melanoma using gene expression profiling: prediction of survival outcome and benefit from molecular targeted therapy.
(
- Contribution to journal › Article
-
Mark
Making breast cancer molecular subtypes robust?
(
- Contribution to journal › Debate/Note/Editorial
-
Mark
MicroRNA-200c-141 and ∆Np63 are required for breast epithelial differentiation and branching morphogenesis.
(
- Contribution to journal › Article
-
Mark
Genome methylation patterns in male breast cancer - Identification of an epitype with hypermethylation of polycomb target genes.
(
- Contribution to journal › Article
-
Mark
Integrative epigenomic analysis of differential DNA methylation in urothelial carcinoma.
(
- Contribution to journal › Article
-
Mark
DNA methylation and histone modifications regulate SOX11 expression in lymphoid and solid cancer cells.
(
- Contribution to journal › Article
-
Mark
Genome-Wide DNA Methylation Analysis in Melanoma Reveals the Importance of CpG Methylation in MITF Regulation.
(
- Contribution to journal › Article
- 2014
-
Mark
Primary Melanoma Tumors from CDKN2A Mutation Carriers do not Belong to a Distinct Molecular Subclass.
(
- Contribution to journal › Article
-
Mark
Genomic and transcriptional alterations in lung adenocarcinoma in relation to smoking history.
(
- Contribution to journal › Article
-
Mark
Genome-wide DNA methylation analysis of lung carcinoma reveals one neuroendocrine and four adenocarcinoma epitypes associated with patient outcome.
(
- Contribution to journal › Article
- 2013
-
Mark
High expression of ZNF703 independent of amplification indicates worse prognosis in patients with luminal B breast cancer
(
- Contribution to journal › Article
-
Mark
Monitoring of technical variation in quantitative high-throughput datasets.
(
- Contribution to journal › Article
-
Mark
Nonfamilial breast cancer subtypes.
(
- Contribution to journal › Scientific review
-
Mark
The Landscape of Candidate Driver Genes Differs between Male and Female Breast Cancer.
(
- Contribution to journal › Article
-
Mark
Methods for analyzing high dimensional data for classifying, diagnosing, prognosticating, and/or predicting diseases and other biological states
2013) US8620592(
- Patent › Patent
-
Mark
Exosomes reflect the hypoxic status of glioma cells and mediate hypoxia-dependent activation of vascular cells during tumor development.
(
- Contribution to journal › Article
- 2012
-
Mark
Gene expression profiling of primary male breast cancers reveals two unique subgroups and identifies N-acetyltransferase-1 (NAT1) as a novel prognostic biomarker
(
- Contribution to journal › Article
-
Mark
The gene expression landscape of breast cancer is shaped by tumor protein p53 status and epithelial-mesenchymal transition
(
- Contribution to journal › Article
-
Mark
DNA methylation analyses of urothelial carcinoma reveal distinct epigenetic subtypes and an association between gene copy number and methylation status.
(
- Contribution to journal › Article
-
Mark
Global H3K27 trimethylation and EZH2 abundance in breast tumor subtypes.
(
- Contribution to journal › Article
-
Mark
Molecular profiling reveals low- and high-grade forms of primary melanoma
(
- Contribution to journal › Article
-
Mark
Characterisation of amplification patterns and target genes at chromosome 11q13 in CCND1-amplified sporadic and familial breast tumours.
(
- Contribution to journal › Article
-
Mark
The retinoblastoma gene undergoes rearrangements in BRCA1-deficient basal-like breast cancer.
(
- Contribution to journal › Article
-
Mark
Sets of probes and primers for the diagnosis of select cancers
2012) US8263759(
- Patent › Patent
-
Mark
A Molecular Taxonomy for Urothelial Carcinoma.
(
- Contribution to journal › Article
- 2011
-
Mark
High-resolution genomic profiling of male breast cancer reveals differences hidden behind the similarities with female breast cancer
(
- Contribution to journal › Article
-
Mark
Landscape of somatic allelic imbalances and copy number alterations in HER2-amplified breast cancer
(
- Contribution to journal › Article
-
Mark
GOBO: Gene Expression-Based Outcome for Breast Cancer Online.
(
- Contribution to journal › Article
-
Mark
CD44 isoforms are heterogeneously expressed in breast cancer and correlate with tumor subtypes and cancer stem cell markers.
(
- Contribution to journal › Article
-
Mark
Endothelial Induced EMT in Breast Epithelial Cells with Stem Cell Properties
(
- Contribution to journal › Article
-
Mark
Methods for analyzing high dimensional data for classifying, diagnosing, prognosticating, and/or predicting diseases and other biological states
2011) US8065092(
- Patent › Patent
- 2010
-
Mark
An integrative genomics screen uncovers ncRNA T-UCR functions in neuroblastoma tumours
(
- Contribution to journal › Article
-
Mark
Genomic subtypes of breast cancer identified by array-comparative genomic hybridization display distinct molecular and clinical characteristics
(
- Contribution to journal › Article
-
Mark
High-resolution genomic and expression analyses of copy number alterations in HER2-amplified breast cancer
(
- Contribution to journal › Article
-
Mark
Prediction of Stage, Grade, and Survival in Bladder Cancer Using Genome Wide Expression Data: A Validation Study.
(
- Contribution to journal › Article
-
Mark
Identification of Subtypes in Human Epidermal Growth Factor Receptor 2-Positive Breast Cancer Reveals a Gene Signature Prognostic of Outcome.
(
- Contribution to journal › Article
-
Mark
Multiple metastases from cutaneous malignant melanoma patients may display heterogeneous genomic and epigenomic patterns.
(
- Contribution to journal › Article
-
Mark
Gene Expression Profiling-Based Identification of Molecular Subtypes in Stage IV Melanomas with Different Clinical Outcome.
(
- Contribution to journal › Article
-
Mark
Genome-wide transcription factor binding site/promoter databases for the analysis of gene sets and co-occurrence of transcription factor binding motifs.
(
- Contribution to journal › Article
-
Mark
Selections of genes and methods of using the same for diagnosis and for targeting the therapy of select cancers
2010) US7655397(
- Patent › Patent
-
Mark
Methods for analyzing high dimensional data for classifying, diagnosing, prognosticating, and/or predicting diseases and other biological states
2010) US7774143(
- Patent › Patent
-
Mark
Methods for analyzing high dimensional data for classifying, diagnosing, prognosticating, and/or predicting diseases and other biological states
2010) US7783431(
- Patent › Patent
-
Mark
Molecular subtypes of breast cancer are associated with characteristic DNA methylation patterns
(
- Contribution to journal › Article
- 2008
-
Mark
The CD44(+)/CD24(-) phenotype is enriched in basal-like breast tumors
(
- Contribution to journal › Article
-
Mark
Segmentation-based detection of allelic imbalance and loss-of-heterozygosity in cancer cells using whole genome SNP arrays
(
- Contribution to journal › Article
-
Mark
High Myc pathway activity and low stage of neuronal differentiation associate with poor outcome in neuroblastoma.
(
- Contribution to journal › Article
-
Mark
Tiling array-CGH for the assessment of genomic similarities among synchronous unilateral and bilateral invasive breast cancer tumor pairs.
(
- Contribution to journal › Article
-
Mark
What is principal component analysis?
(
- Contribution to journal › Article
-
Mark
Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios.
(
- Contribution to journal › Article
- 2007
-
Mark
High-resolution genomic profiles of breast cancer cell lines assessed by tiling BAC array comparative genomic hybridization.
(
- Contribution to journal › Article
-
Mark
Revealing signaling pathway deregulation by using gene expression signatures and regulatory motif analysis
(
- Contribution to journal › Article
-
Mark
Normalization of array-CGH data: influence of copy number imbalances
(
- Contribution to journal › Article
-
Mark
Classification of genomic and proteomic data using support vector machines
2007) p.187-202(
- Chapter in Book/Report/Conference proceeding › Book chapter
-
Mark
Genomic profiling of malignant melanoma using tiling-resolution arrayCGH.
(
- Contribution to journal › Article
-
Mark
Poor prognosis in carcinoma is associated with a gene expression signature of aberrant PTEN tumor suppressor pathway activity
(
- Contribution to journal › Article
-
Mark
SPECLUST: a web tool for clustering of mass spectra
2007) In LU TP 07-14(
- Book/Report › Report
- 2006
-
Mark
Detection and identification of protein isoforms using cluster analysis of MALDI-MS mass spectra
(
- Contribution to journal › Article
-
Mark
Osteopontin is a downstream effector of the PI3-kinase pathway in melanomas that is inversely correlated with functional PTEN
(
- Contribution to journal › Article
-
Mark
An evaluation of using ensembles of classifiers for predictions based on genomic and proteomic data
2006) In LU TP 06-19(
- Book/Report › Report
- 2005
-
Mark
Folding free energies of 5'-UTRs impact post-transcriptional regulation on a genomic scale in yeast
(
- Contribution to journal › Article
-
Mark
Distinct genomic profiles in hereditary breast tumors identified by array-based comparative genomic hybridization.
(
- Contribution to journal › Article
-
Mark
Gene expression profiling demonstrates that TGF-{beta}1 signals exclusively through receptor complexes involving Alk5 and identifies targets of TGF-{beta} signaling.
(
- Contribution to journal › Article
-
Mark
Microarray-based Analyses of Hypoxia-induced Transcriptional Changes in Breast Cancer Cell Lines
(
- Contribution to journal › Article
-
Mark
Method for protein structure alignment
2005) US6859736(
- Patent › Patent
- 2004
-
Mark
Microarray expression profiling in melanoma reveals a BRAF mutation signature
(
- Contribution to journal › Article
-
Mark
Predicting continuous values of prognostic markers in breast cancer from microarray gene expression profiles.
(
- Contribution to journal › Article
-
Mark
A strategy for identifying putative causes of gene expression variation in human cancers
(
- Contribution to journal › Article
-
Mark
Multiclass discovery in array data
(
- Contribution to journal › Article
-
Mark
A method for finding putative causes of gene expression variation
(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
-
Mark
ACID: a database for microarray clone information
(
- Contribution to journal › Article
- 2003
-
Mark
Molecular classification of familial non-BRCA1/BRCA2 breast cancer
(
- Contribution to journal › Article
-
Mark
Analyzing tumor gene expression profiles
(
- Contribution to journal › Article
-
Mark
Gene expression profile in multiple sclerosis patients and healthy controls: identifying pathways relevant to disease
(
- Contribution to journal › Article
-
Mark
Expression profiling to predict outcome in breast cancer: the influence of sample selection
(
- Contribution to journal › Article
-
Mark
Microarray-based cancer diagnosis with artificial neural networks
(
- Contribution to journal › Scientific review
-
Mark
The gene expression response of breast cancer to growth regulators: Patterns and correlation with tumor expression profiles
(
- Contribution to journal › Article
-
Mark
Matching protein structures with fuzzy alignments
(
- Contribution to journal › Article
-
Mark
Classification of Expression Patterns Using Artificial Neural Networks
2003) p.201-215(
- Chapter in Book/Report/Conference proceeding › Book chapter
-
Mark
Gene expression profiles in a panel of childhood leukemia cell lines mirror critical features of the disease
(
- Contribution to journal › Article
- 2002
-
Mark
Analyzing array data using supervised methods
(
- Contribution to journal › Scientific review
-
Mark
Impact of DNA amplification on gene expression patterns in breast cancer
(
- Contribution to journal › Article
-
Mark
Gene expression in inherited breast cancer
(
- Contribution to journal › Scientific review
-
Mark
A Strategy for Identifying Putative Causes of Gene Expression Variation in Human Cancer
2002)(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
- 2001
-
Mark
Estrogen receptor status in breast cancer is associated with remarkably distinct gene expression patterns
(
- Contribution to journal › Article
-
Mark
Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks
(
- Contribution to journal › Article
-
Mark
Gastrointestinal stromal tumors with KIT mutations exhibit a remarkably homogeneous gene expression profile
(
- Contribution to journal › Article
- 2000
-
Mark
A novel approach to structure alignment
2000) In LU TP 00-07(
- Book/Report › Report
- 1999
-
Mark
The Feynman-Wilson gas and the Lund model
(
- Contribution to journal › Article
-
Mark
Transverse and longitudinal Bose-Einstein correlations in e(+)e(-) annihilation
(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
-
Mark
Three-particle Bose-Einstein correlations - a sensitive probe for Lund string fragmentation
(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
- 1998
-
Mark
Is there screwiness at the end of the QCD cascades?
1998) In Journal of High Energy Physics(
- Contribution to journal › Article
-
Mark
Bose-Einstein correlations in the Lund model
(
- Contribution to journal › Article
-
Mark
Transverse and longitudinal Bose-Einstein correlations
1998) In Physics Letters. Section B: Nuclear, Elementary Particle and High-Energy Physics 421(1-4). p.283-288(
- Contribution to journal › Article
-
Mark
Bose-Einstein and colour interference in W-pair decays
(
- Contribution to journal › Article
-
Mark
Correlations in multiparticle production
1998)(
- Thesis › Doctoral thesis (compilation)
-
Mark
An investigation of screwiness in hadronic final states from DELPHI
1998) In DELPHI 98-156 PHYS 799(
- Book/Report › Report
- 1993
-
Mark
Monte Carlo simulation of a multiparticle imaging Cherenkov counter
1993) In NA44-NOTE 142(
- Book/Report › Report