Mattias Aine

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2025
Mark The DNA methylation landscape of primary triple-negative breast cancer
Aine, Mattias ^LU ; Nacer, Deborah F ^LU ; Arbajian, Elsa ^LU ; Veerla, Srinivas ^LU ; Karlsson, Anna ^LU ; Häkkinen, Jari ^LU ; Johansson, Henrik J ; Rosengren, Frida ^LU ; Vallon-Christersson, Johan ^LU and Borg, Åke ^LU , et al. (2025) In Nature Communications 16. p.1-23
- Contribution to journal › Article
2024
Mark Tumor purity estimated from bulk DNA methylation can be used for adjusting beta values of individual samples to better reflect tumor biology
Sasiain, Inaki ^LU ; Nacer, Deborah F. ^LU ; Aine, Mattias ^LU ; Veerla, Srinivas ^LU and Staaf, Johan ^LU (2024) In NAR Genomics and Bioinformatics 6(4).
- Contribution to journal › Article
Mark Tumour immune characterisation of primary triple-negative breast cancer using automated image quantification of immunohistochemistry-stained immune cells
Roostee, Suze ^LU ; Ehinger, Daniel ^LU ; Jönsson, Mats ^LU ; Phung, Bengt ^LU ; Jönsson, Göran ^LU ; Sjödahl, Gottfrid ^LU ; Staaf, Johan ^LU and Aine, Mattias ^LU (2024) In Scientific Reports 14(1).
- Contribution to journal › Article
2023
Mark Molecular characteristics of lung adenocarcinoma with respect to patient age at diagnosis
Staaf, Johan ^LU ; Aine, Mattias ^LU ; Nacer, Deborah F. ^LU ; Planck, Maria ^LU and Arbajian, Elsa ^LU (2023) In International Journal of Cancer 153(1). p.197-209
- Contribution to journal › Article
2022
Mark SRIQ clustering : A fusion of Random Forest, QT clustering, and KNN concepts
Karlström, Jacob ^LU ; Aine, Mattias ^LU ; Staaf, Johan ^LU and Veerla, Srinivas ^LU (2022) In Computational and Structural Biotechnology Journal 20. p.1567-1579
- Contribution to journal › Article
Mark Tumor purity adjusted beta values improve biological interpretability of high-dimensional DNA methylation data
Staaf, Johan ^LU and Aine, Mattias ^LU (2022) In PLoS ONE 17(9 September).
- Contribution to journal › Article
2021
Mark Molecular analyses of triple-negative breast cancer in the young and elderly
Aine, Mattias ^LU ; Boyaci, Ceren ; Hartman, Johan ; Häkkinen, Jari ^LU ; Mitra, Shamik ^LU ; Campos, Ana Bosch ^LU ; Nimeus, Emma ^LU ; Ehinger, Anna ^LU ; Vallon-Christersson, Johan ^LU and Borg, Åke ^LU , et al. (2021) In Breast cancer research : BCR 23(1).
- Contribution to journal › Article
Mark Proteogenomics of non-small cell lung cancer reveals molecular subtypes associated with specific therapeutic targets and immune-evasion mechanisms
Lehtiö, Janne ; Arslan, Taner ; Siavelis, Ioannis ; Pan, Yanbo ; Socciarelli, Fabio ; Berkovska, Olena ; Umer, Husen M. ; Mermelekas, Georgios ; Pirmoradian, Mohammad and Jönsson, Mats ^LU , et al. (2021) In Nature Cancer 2(11). p.1224-1242
- Contribution to journal › Article
2020
Mark Comprehensive molecular comparison of BRCA1 hypermethylated and BRCA1 mutated triple negative breast cancers
Glodzik, Dominik ^LU ; Bosch, Ana ^LU ; Hartman, Johan ; Aine, Mattias ^LU ; Vallon-Christersson, Johan ^LU ; Reuterswärd, Christel ^LU ; Karlsson, Anna ^LU ; Mitra, Shamik ^LU ; Niméus, Emma ^LU and Holm, Karolina ^LU , et al. (2020) In Nature Communications 11(1).
- Contribution to journal › Article
Mark Reply To Kenneth B. Yatai, Mark J. Dunning, Dennis Wang. Consensus Genomic Subtypes of Muscle-invasive Bladder Cancer : A Step in the Right Direction but Still a Long Way To Go.
Kamoun, Aurélie ; de Reyniès, Aurélien ; Allory, Yves ; Sjödahl, Gottfrid ^LU ; Robertson, A. Gordon ; Seiler, Roland ; Hoadley, Katherine A. ; Groeneveld, Clarice S. ; Al-Ahmadie, Hikmat and Choi, Woonyoung , et al. (2020) In European Urology 77(4). p.436-438
- Contribution to journal › Debate/Note/Editorial

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