Johan Staaf

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2020
Mark Whole-genome sequencing of triple negative breast cancers in a standard population-based clinical setting
Staaf, Johan ^LU ; Glodzik, Dominik ^LU ; Bosch Campos, Ana ^LU ; Vallon-Christersson, Johan ^LU ; Reuterswärd, Christel ^LU ; Häkkinen, Jari ^LU ; Degasperi, Andrea ; Amarante, Tauanne Dias ; Saal, Lao ^LU and Hegardt, Cecilia ^LU , et al. (2020) UK Interdisciplinary Breast Cancer Symposium 2020 In Breast Cancer Research and Treatment 180. p.531-532
- Contribution to journal › Published meeting abstract
Mark Analysis of DNA methylation patterns in the tumor immune microenvironment of metastatic melanoma
Mitra, Shamik ^LU ; Lauss, Martin ^LU ; Cabrita, Rita ^LU ; Choi, Jiyeon ; Zhang, Tongwu ; Isaksson, Karolin ^LU ; Olsson, Håkan ^LU ; Ingvar, Christian ^LU ; Carneiro, Ana ^LU and Staaf, Johan ^LU , et al. (2020) In Molecular Oncology 14(5). p.933-950
- Contribution to journal › Article
Mark Analysis of human papillomaviruses and human polyomaviruses in lung cancer from Swedish never-smokers
Ramqvist, Torbjörn ; Ortiz-Villalon, Christian ; Brandén, Eva ; Koyi, Hirsh ; de Petris, Luigi ; Wagenius, Gunnar ; Brodin, Ola ; Reuterswärd, Christel ^LU ; Dalianis, Tina and Jönsson, Mats ^LU , et al. (2020) In Acta Oncologica 59(1). p.28-32
- Contribution to journal › Letter
Mark Comprehensive molecular comparison of BRCA1 hypermethylated and BRCA1 mutated triple negative breast cancers
Glodzik, Dominik ^LU ; Bosch, Ana ^LU ; Hartman, Johan ; Aine, Mattias ^LU ; Vallon-Christersson, Johan ^LU ; Reuterswärd, Christel ^LU ; Karlsson, Anna ^LU ; Mitra, Shamik ^LU ; Niméus, Emma ^LU and Holm, Karolina ^LU , et al. (2020) In Nature Communications 11(1).
- Contribution to journal › Article
Mark Independent Validation of Early-Stage Non-Small Cell Lung Cancer Prognostic Scores Incorporating Epigenetic and Transcriptional Biomarkers With Gene-Gene Interactions and Main Effects
Zhang, Ruyang ; Chen, Chao ; Dong, Xuesi ; Shen, Sipeng ; Lai, Linjing ; He, Jieyu ; You, Dongfang ; Lin, Lijuan ; Zhu, Ying and Huang, Hui , et al. (2020) In Chest 158(2). p.808-819
- Contribution to journal › Article
2019
Mark EGLN2 DNA methylation and expression interact with HIF1A to affect survival of early-stage NSCLC
Zhang, Ruyang ; Lai, Linjing ; He, Jieyu ; Chen, Chao ; You, Dongfang ; Duan, Weiwei ; Dong, Xuesi ; Zhu, Ying ; Lin, Lijuan and Shen, Sipeng , et al. (2019) In Epigenetics 14(2). p.118-129
- Contribution to journal › Article
Mark SIPA1L3 methylation modifies the benefit of smoking cessation on lung adenocarcinoma survival : an epigenomic–smoking interaction analysis
Zhang, Ruyang ; Lai, Linjing ; Dong, Xuesi ; He, Jieyu ; You, Dongfang ; Chen, Chao ; Lin, Lijuan ; Zhu, Ying ; Huang, Hui and Shen, Sipeng , et al. (2019) In Molecular Oncology 13(5). p.1235-1248
- Contribution to journal › Article
Mark A combined gene expression tool for parallel histological prediction and gene fusion detection in non-small cell lung cancer
Karlsson, Anna ^LU ; Cirenajwis, Helena ^LU ; Ericson-Lindquist, Kajsa ^LU ; Brunnström, Hans ^LU ; Reuterswärd, Christel ^LU ; Jönsson, Mats ^LU ; Ortiz-Villalón, Cristian ; Hussein, Aziz ; Bergman, Bengt and Vikström, Anders , et al. (2019) In Scientific Reports 9(1).
- Contribution to journal › Article
Mark Clinical Application of Fusion Gene Detection Using Next-Generation Sequencing and the NanoString Technology
Karlsson, Anna ^LU and Staaf, Johan ^LU (2019) In Methods in molecular biology (Clifton, N.J.) 1908. p.139-152
- Contribution to journal › Article
Mark Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation
Brinkman, Arie B. ; Nik-Zainal, Serena ; Simmer, Femke ; Rodríguez-González, F. Germán ; Smid, Marcel ; Alexandrov, Ludmil B. ; Butler, Adam ; Martin, Sancha ; Davies, Helen and Glodzik, Dominik ^LU , et al. (2019) In Nature Communications 10(1).
- Contribution to journal › Article

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