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2016
Mark Implementation of an Open Source Software solution for Laboratory Information Management and automated RNAseq data analysis in a large-scale Cancer Genomics initiative using BASE with extension package Reggie.
Häkkinen, Jari ^LU ; Nordborg, Nicklas ^LU ; Månsson, Olle ^LU and Vallon-Christersson, Johan ^LU (2016)
- Working paper/Preprint › Preprint in preprint archive
Mark Multiregion whole-exome sequencing uncovers the genetic evolution and mutational heterogeneity of early-stage metastatic melanoma
Harbst, Katja ^LU ; Lauss, Martin ^LU ; Cirenajwis, Helena ^LU ; Isaksson, Karolin ^LU ; Rosengren, Frida ^LU ; Törngren, Therese ^LU ; Kvist, Anders ^LU ; Johansson, Maria C. ^LU ; Vallon-Christersson, Johan ^LU and Baldetorp, Bo ^LU , et al. (2016) In Cancer Research 76(16). p.4765-4774
- Contribution to journal › Article
Mark Spatial Transcriptomics. Digital Pathology to Investigate Intratumor Heterogeneity in Breast Cancer.
Salmén, Fredrik ; Vickovic, Sanja ; Jemt, Anders ; Bergenstråhle, Joseph ; Fernandez, José ; Mollbrink, Annelie ; Vallon-Christersson, Johan ^LU ; Staaf, Johan ^LU ; Häkkinen, Jari ^LU and Ehinger, Anna ^LU , et al. (2016) AGBT Advances in Genome Biology and Technology meeting.
- Contribution to conference › Poster
Mark Targeted sequencing of BRCA1 and BRCA2 across a large unselected breast cancer cohort suggests that one-third of mutations are somatic
Winter, C ^LU ; Nilsson, M P ^LU ; Olsson, E ^LU ; George, A M ^LU ; Chen, Y ^LU ; Kvist, A ^LU ; Törngren, T ^LU ; Vallon-Christersson, J ^LU ; Hegardt, C ^LU and Häkkinen, J ^LU , et al. (2016) In Annals of Oncology 27(8). p.8-1532
- Contribution to journal › Article
2015
Mark The Sweden Cancerome Analysis Network - Breast (SCAN-B) Initiative: a large-scale multicenter infrastructure towards implementation of breast cancer genomic analyses in the clinical routine.
Saal, Lao ^LU ; Vallon-Christersson, Johan ^LU ; Häkkinen, Jari ^LU ; Hegardt, Cecilia ^LU ; Grabau, Dorthe ^LU ; Winter, Christof ^LU ; Brueffer, Christian ^LU ; Tang, Man-Hung Eric ^LU ; Reuterswärd, Christel ^LU and Schulz, Ralph ^LU , et al. (2015) In Genome Medicine 7(1).
- Contribution to journal › Article
2014
Mark Erythropoietin suppresses the activation of pro-apoptotic genes in head and neck squamous cell carcinoma xenografts exposed to surgical trauma.
Lindgren, Gustaf ^LU ; Ekblad, Lars ^LU ; Vallon-Christersson, Johan ^LU ; Kjellén, Elisabeth ^LU ; Gebre-Medhin, Maria ^LU and Wennerberg, Johan ^LU (2014) In BMC Cancer 14.
- Contribution to journal › Article
Mark The HER2-Encoded miR-4728-3p Regulates ESR1 through a Non-Canonical Internal Seed Interaction.
Newie, Inga ^LU ; Sökilde, Rolf ^LU ; Persson, Helena ^LU ; Grabau, Dorthe ^LU ; Rego, Natalia ; Kvist, Anders ^LU ; von Stedingk, Kristoffer ^LU ; Axelson, Håkan ^LU ; Borg, Åke ^LU and Vallon-Christersson, Johan ^LU , et al. (2014) In PLoS ONE 9(5).
- Contribution to journal › Article
2013
Mark High expression of ZNF703 independent of amplification indicates worse prognosis in patients with luminal B breast cancer
Reynisdottir, Inga ; Arason, Adalgeir ; Einarsdottir, Berglind ; Gunnarsson, Haukur ; Staaf, Johan ^LU ; Vallon-Christersson, Johan ^LU ; Jönsson, Göran B ^LU ; Ringnér, Markus ^LU ; Agnarsson, Bjarni and Olafsdottir, Kristrun , et al. (2013) In Cancer Medicine 2(4). p.437-446
- Contribution to journal › Article
2012
Mark The retinoblastoma gene undergoes rearrangements in BRCA1-deficient basal-like breast cancer.
Jönsson, Göran B ^LU ; Staaf, Johan ^LU ; Vallon-Christersson, Johan ^LU ; Ringnér, Markus ^LU ; Gruvberger, Sofia ^LU ; Saal, Lao ^LU ; Holm, Karolina ^LU ; Hegardt, Cecilia ^LU ; Arason, Adalgeir and Fagerholm, Rainer , et al. (2012) In Cancer Research 72(16). p.4028-4036
- Contribution to journal › Article
Mark Molecular profiling reveals low- and high-grade forms of primary melanoma
Harbst, Katja ^LU ; Staaf, Johan ^LU ; Lauss, Martin ^LU ; Karlsson, Anna ; Måsbäck, Anna ^LU ; Johansson, Iva ^LU ; Bendahl, Pär-Ola ^LU ; Vallon-Christersson, Johan ^LU ; Törngren, Therese ^LU and Ekedahl, Henrik ^LU , et al. (2012) In Clinical Cancer Research 18(15). p.4026-4036
- Contribution to journal › Article

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