Research Group Lung Cancer

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2020
Mark Inferring structural variant cancer cell fraction
Cmero, Marek ; Yuan, Ke ; Ong, Cheng Soon ; Schröder, Jan ; Corcoran, Niall M ; Papenfuss, Tony ; Hovens, Christopher M ; Markowetz, Florian and Macintyre, Geoff (2020) In Nature Communications 11.
- Contribution to journal › Article
Mark Integrative pathway enrichment analysis of multivariate omics data
Paczkowska, Marta ; Barenboim, Jonathan ; Sintupisut, Nardnisa ; Fox, Natalie S ; Zhu, Helen ; Abd-Rabbo, Diala ; Mee, Miles W ; Boutros, Paul C and Reimand, Jüri (2020) In Nature Communications 11.
- Contribution to journal › Article
Mark A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns
Jiao, Wei ; Atwal, Gurnit ; Polak, Paz ; Karlic, Rosa ; Cuppen, Edwin ; Danyi, Alexandra ; de Ridder, Jeroen ; van Herpen, Carla ; Lolkema, Martijn P and Steeghs, Neeltje , et al. (2020) In Nature Communications 11.
- Contribution to journal › Article
Mark Pathway and network analysis of more than 2500 whole cancer genomes
Reyna, Matthew A ; Haan, David ; Paczkowska, Marta ; Verbeke, Lieven P C ; Vazquez, Miguel ; Kahraman, Abdullah ; Pulido-Tamayo, Sergio ; Barenboim, Jonathan ; Wadi, Lina and Dhingra, Priyanka , et al. (2020) In Nature Communications 11.
- Contribution to journal › Article
Mark Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis
Carlevaro-Fita, Joana ; Lanzós, Andrés ; Feuerbach, Lars ; Hong, Chen ; Mas-Ponte, David ; Pedersen, Jakob Skou ; Johnson, Rory ; Abascal, Federico and von Mering, Christian (2020) In Communications Biology 3.
- Contribution to journal › Article
Mark The evolutionary history of 2,658 cancers
Gerstung, Moritz ; Jolly, Clemency ; Leshchiner, Ignaty ; Dentro, Stefan C ; Gonzalez, Santiago ; Rosebrock, Daniel ; Mitchell, Thomas J ; Rubanova, Yulia ; Anur, Pavana and Yu, Kaixian , et al. (2020) In Nature 578(7793). p.122-128
- Contribution to journal › Article
Mark Patterns of somatic structural variation in human cancer genomes
Li, Yilong ; Roberts, Nicola D ; Wala, Jeremiah A ; Shapira, Ofer ; Schumacher, Steven E ; Kumar, Kiran ; Khurana, Ekta ; Waszak, Sebastian ; Korbel, Jan O and Haber, James E , et al. (2020) In Nature 578(7793). p.112-121
- Contribution to journal › Article
Mark The repertoire of mutational signatures in human cancer
Alexandrov, Ludmil B ; Kim, Jaegil ; Haradhvala, Nicholas J ; Huang, Mi Ni ^LU ; Tian Ng, Alvin Wei ; Wu, Yang ; Boot, Arnoud ; Covington, Kyle R ; Gordenin, Dmitry A and Bergstrom, Erik N , et al. (2020) In Nature 578(7793). p.94-101
- Contribution to journal › Article
Mark Comprehensive molecular characterization of mitochondrial genomes in human cancers
Yuan, Yuan ; Ju, Young Seok ; Kim, Youngwook ; Li, Jun ; Wang, Yumeng ; Yoon, Christopher J ; Yang, Yang ; Martincorena, Inigo ; Creighton, Chad J and Weinstein, John N , et al. (2020) In Nature Genetics 52(3). p.342-352
- Contribution to journal › Article
Mark Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition
Rodriguez-Martin, Bernardo ; Alvarez, Eva G ; Baez-Ortega, Adrian ; Zamora, Jorge ; Supek, Fran ; Demeulemeester, Jonas ; Santamarina, Martin ; Ju, Young Seok ; Temes, Javier and Garcia-Souto, Daniel , et al. (2020) In Nature Genetics 52(3). p.306-319
- Contribution to journal › Article

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