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- 2024
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Mark
Photophysical image analysis : Unsupervised probabilistic thresholding for images from electron-multiplying charge-coupled devices
(
- Contribution to journal › Article
- 2023
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Mark
Equilibrium melting probabilities of a DNA molecule with a defect : An exact solution of the Poland-Scheraga model
(
- Contribution to journal › Article
- 2022
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Mark
A simple cut and stretch assay to detect antimicrobial resistance genes on bacterial plasmids by single-molecule fluorescence microscopy
(
- Contribution to journal › Article
- 2021
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Mark
Detection of structural variations in densely-labelled optical DNA barcodes : A hidden Markov model approach
(
- Contribution to journal › Article
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Mark
Modeling protein target search in human chromosomes
(
- Contribution to journal › Article
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Mark
A Predictive Model of Antibody Binding in the Presence of IgG-Interacting Bacterial Surface Proteins
(
- Contribution to journal › Article
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Mark
Combining dense and sparse labeling in optical DNA mapping
(
- Contribution to journal › Article
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Mark
CRISPR/CAS9 BASED DNA-COMBING ASSAY FOR DETECTING ANTIMICROBIAL RESISTANCE GENES ON PLASMIDS
2021) 25th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2021 p.801-802(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
- 2020
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Mark
Cultivation-Free Typing of Bacteria Using Optical DNA Mapping
(
- Contribution to journal › Article
- 2019
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Mark
Optical DNA Mapping Combined with Cas9-Targeted Resistance Gene Identification for Rapid Tracking of Resistance Plasmids in a Neonatal Intensive Care Unit Outbreak
(
- Contribution to journal › Article
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Mark
Enzyme-free optical DNA mapping of the human genome using competitive binding
(
- Contribution to journal › Article
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Mark
Bacterial identification by optical mapping of genomic DNA in nanofluidic channels
2019) 23rd International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2019 In 23rd International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2019 p.821-822(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
- 2018
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Mark
The resistomes of six carbapenem-resistant pathogens - a critical genotype-phenotype analysis
(
- Contribution to journal › Article
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Mark
Stochastic unfolding of nanoconfined DNA : Experiments, model and Bayesian analysis
(
- Contribution to journal › Article
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Mark
Zero-crossing statistics for non-Markovian time series
(
- Contribution to journal › Article
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Mark
Facilitated sequence assembly using densely labeled optical DNA barcodes : A combinatorial auction approach
(
- Contribution to journal › Article
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Mark
Fitting a function to time-dependent ensemble averaged data
(
- Contribution to journal › Article
- 2017
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Mark
Tracer particles in two-dimensional elastic networks diffuse logarithmically slow
(
- Contribution to journal › Article
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Mark
Tracer particle diffusion in a system with hardcore interacting particles
(
- Contribution to journal › Article
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Mark
Noise reduction in single time frame optical DNA maps
(
- Contribution to journal › Article
- 2016
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Mark
Detailed characterization of plasmids carrying resistance genes using optical DNA mapping
2016) 20th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2016 p.1561-1562(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
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Mark
Rapid tracing of resistance plasmids in a nosocomial outbreak using optical DNA mapping
(
- Contribution to journal › Article
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Mark
A simple method to calculate first-passage time densities with arbitrary initial conditions
(
- Contribution to journal › Article
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Mark
Direct identification of antibiotic resistance genes on single plasmid molecules using CRISPR/Cas9 in combination with optical DNA mapping
(
- Contribution to journal › Article
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Mark
Rapid identification of intact bacterial resistance plasmids via optical mapping of single DNA molecules
(
- Contribution to journal › Article
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Mark
Super-Resolution Genome Mapping in Silicon Nanochannels
(
- Contribution to journal › Article
- 2015
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Mark
A fast and scalable kymograph alignment algorithm for nanochannel-based optical DNA mappings.
(
- Contribution to journal › Article
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Mark
Visualizing the entire DNA from a chromosome in a single frame
(
- Contribution to journal › Article
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Mark
Many-body effects on tracer particle diffusion with applications for single-protein dynamics on DNA
(
- Contribution to journal › Article
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Mark
Model for melting of confined DNA
(
- Contribution to journal › Article
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Mark
Nanoconfined Circular and Linear DNA: Equilibrium Conformations and Unfolding Kinetics
(
- Contribution to journal › Article
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Mark
Bacteriophage strain typing by rapid single molecule analysis.
(
- Contribution to journal › Article
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Mark
How nanochannel confinement affects the DNA melting transition within the Poland-Scheraga model.
(
- Contribution to journal › Article
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Mark
Extension of nanoconfined DNA: Quantitative comparison between experiment and theory
(
- Contribution to journal › Article
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Mark
Fast size-determination of intact bacterial plasmids using nanofluidic channels
(
- Contribution to journal › Article
- 2014
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Mark
Single-file diffusion with non-thermal initial conditions
(
- Contribution to journal › Article
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Mark
Ageing single file motion
(
- Contribution to journal › Article
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Mark
Severe slowing-down and universality of the dynamics in disordered interacting many-body systems: ageing and ultraslow diffusion
(
- Contribution to journal › Article
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Mark
Universality and nonuniversality of mobility in heterogeneous single-file systems and Rouse chains
(
- Contribution to journal › Article
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Mark
Non-Markovian effects in the first-passage dynamics of obstructed tracer particle diffusion in one-dimensional systems.
(
- Contribution to journal › Article
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Mark
Competitive binding-based optical DNA mapping for fast identification of bacteria - multi-ligand transfer matrix theory and experimental applications on Escherichia coli.
(
- Contribution to journal › Article
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Mark
Nanoconfined circular DNA
2014) 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2014 p.1353-1355(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
- 2013
-
Mark
Microscopic Origin of the Logarithmic Time Evolution of Aging Processes in Complex Systems
(
- Contribution to journal › Article
-
Mark
Perturbative solution to susceptible-infected-susceptible epidemics on networks.
(
- Contribution to journal › Article
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Mark
Identifying bacteria using DNA binding maps
2013) 17th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2013 1. p.473-475(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
- 2012
-
Mark
First passage times for a tracer particle in single file diffusion and fractional Brownian motion.
(
- Contribution to journal › Article
- 2011
-
Mark
Dissimilar bouncy walkers
(
- Contribution to journal › Article
- 2010
-
Mark
Observing Plasmonic-Molecular Resonance Coupling on Single Gold Nanorods
(
- Contribution to journal › Article
-
Mark
Foundation of fractional Langevin equation: Harmonization of a many-body problem
(
- Contribution to journal › Article
- 2009
-
Mark
Diffusion of finite-sized hard-core interacting particles in a one-dimensional box: Tagged particle dynamics
(
- Contribution to journal › Article
-
Mark
Bubble merging in breathing DNA as a vicious walker problem in opposite potentials.
(
- Contribution to journal › Article
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Mark
Single DNA denaturation and bubble dynamics
(
- Contribution to journal › Article
- 2008
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Mark
Diffusion of two particles with a finite interaction potential in one dimension
(
- Contribution to journal › Article
-
Mark
Single-file dynamics with different diffusion constants
(
- Contribution to journal › Article
-
Mark
Single-File Diffusion in a Box
(
- Contribution to journal › Article
- 2007
-
Mark
Bubble coalescence in breathing DNA: Two vicious walkers in opposite potentials
(
- Contribution to journal › Article
-
Mark
Applying a potential across a biomembrane: Electrostatic contribution to the bending rigidity and membrane instability
(
- Contribution to journal › Article
-
Mark
Breathing Dynamics in Heteropolymer DNA
(
- Contribution to journal › Article
-
Mark
Master equation approach to DNA breathing in heteropolymer DNA
(
- Contribution to journal › Article
-
Mark
Single DNA conformations and biological function
(
- Contribution to journal › Scientific review
- 2006
-
Mark
Sequence Sensitivity of Breathing Dynamics in Heteropolymer DNA
(
- Contribution to journal › Article
-
Mark
Resonant coupling between localized plasmons and anisotropic molecular coatings in ellipsoidal metal nanoparticles
(
- Contribution to journal › Article
- 2005
-
Mark
Dynamic Approach to DNA Breathing
(
- Contribution to journal › Article
-
Mark
Optimal Target Search on a Fast-Folding Polymer Chain with Volume Exchange
(
- Contribution to journal › Article
-
Mark
Blinking statistics of a molecular beacon triggered by end-denaturation of DNA
(
- Contribution to journal › Article
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Mark
Directed motion emerging from two coupled random processes: translocation of a chain through a membrane nanopore driven by binding proteins
(
- Contribution to journal › Article
-
Mark
Stochastic approach to DNA breathing dynamics
(
- Contribution to journal › Article
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Mark
Sensing DNA–DNA as Nanosensor: A Perspective Towards Nanobiotechnology
(
- Contribution to journal › Article
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Mark
Coupled dynamics of DNA breathing and of proteins that selectively bind to single-stranded DNA
(
- Contribution to journal › Article
-
Mark
Binding dynamics of single-stranded DNA binding proteins to fluctuating bubbles in breathing DNA
(
- Contribution to journal › Article
-
Mark
Dynamics of DNA conformations and DNA-protein interaction
(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
- 2004
-
Mark
Chaperone-assisted translocation
(
- Contribution to journal › Article
-
Mark
Electromagnetic response of a dipole-coupled ellipsoidal bilayer
(
- Contribution to journal › Article
-
Mark
On the dipolar polarizability of ellipsoidal nano-particles with anisotropic coating
2004) p.265-265(
- Chapter in Book/Report/Conference proceeding › Paper in conference proceeding
- 2003
-
Mark
Dipolar response of an ellipsoidal particle with an anisotropic coating
(
- Contribution to journal › Article
-
Mark
Ellipsoidal particles driven by intensity gradients through viscous fluids
(
- Contribution to journal › Article
- 2002
-
Mark
Charged polymer membrane translocation
(
- Contribution to journal › Article
- 2001
-
Mark
Nature of polarized excitons
(
- Contribution to journal › Article