Infection Medicine Proteomics

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2021
Mark The structure of human dermatan sulfate epimerase 1 emphasizes the importance of C5-epimerization of glucuronic acid in higher organisms
Hasan, Mahmudul ^LU ; Khakzad, Hamed ; Happonen, Lotta ^LU ; Sundin, Anders ^LU ; Unge, Johan ^LU ; Mueller, Uwe ; Malmström, Johan ^LU ; Westergren-Thorsson, Gunilla ^LU ; Malmström, Lars ^LU and Ellervik, Ulf ^LU , et al. (2021) In Chemical Science 12(5). p.1869-1885
- Contribution to journal › Article
Mark Multinodal Acoustic Trapping Enables High Capacity and High Throughput Enrichment of Extracellular Vesicles and Microparticles in miRNA and MS Proteomics Studies
Broman, Axel ^LU ; Lenshof, Andreas ^LU ; Evander, Mikael ^LU ; Happonen, Lotta ^LU ; Ku, Anson ^LU ; Malmström, Johan ^LU and Laurell, Thomas ^LU (2021) In Analytical Chemistry 93(8). p.3929-3937
- Contribution to journal › Article
Mark Streptococcus pyogenes Forms Serotype- and Local Environment-Dependent Interspecies Protein Complexes
Chowdhury, Sounak ^LU ; Khakzad, Hamed ; Bergdahl, Gizem Ertürk ^LU ; Lood, Rolf ^LU ; Ekstrom, Simon ^LU ; Linke, Dirk ; Malmström, Lars ^LU ; Happonen, Lotta ^LU and Malmström, Johan ^LU (2021) In mSystems 6(5). p.1-19
- Contribution to journal › Article
Mark Extending the Proteomic Characterization of Candida albicans Exposed to Stress and Apoptotic Inducers through Data-Independent Acquisition Mass Spectrometry
Amador-García, Ahinara ; Zapico, Inés ; Borrajo, Ana ; Malmström, Johan ^LU ; Monteoliva, Lucía and Gil, Concha (2021) In mSystems 6(5).
- Contribution to journal › Article
Mark Endothelial Heparan Sulfate Mediates Hepatic Neutrophil Trafficking and Injury during Staphylococcus aureus Sepsis
Golden, Gregory J ; Toledo, Alejandro Gómez ^LU ; Marki, Alex ; Sorrentino, James T ; Morris, Claire ; Riley, Raquel J ; Spliid, Charlotte ; Chen, Qiongyu ; Cornax, Ingrid and Lewis, Nathan E , et al. (2021) In mBio 12(5).
- Contribution to journal › Article
Mark Targeted selected reaction monitoring verifies histology specific peptide signatures in epithelial ovarian cancer
Liljedahl, Leena ^LU ; Malmström, Johan ^LU ; Kristjansdottir, Björg ; Waldemarson, Sofia ^LU and Sundfeldt, Karin (2021) In Cancers 13(22).
- Contribution to journal › Article
Mark Proteogenomic Workflow Reveals Molecular Phenotypes Related to Breast Cancer Mammographic Appearance
De Marchi, Tommaso ^LU ; Pyl, Paul Theodor ^LU ; Sjöström, Martin ^LU ; Klasson, Stina ^LU ; Sartor, Hanna ^LU ; Tran, Lena ^LU ; Pekar, Gyula ; Malmström, Johan ^LU ; Malmström, Lars ^LU and Niméus, Emma ^LU (2021) In Journal of Proteome Research 20(5). p.2983-3001
- Contribution to journal › Article
Mark Cerebrospinal fluid proteome maps detect pathogen-specific host response patterns in meningitis
Bakochi, Anahita ^LU ; Mohanty, Tirthankar ^LU ; Pyl, Paul Theodor ^LU ; Gueto-Tettay, Carlos Alberto ^LU ; Malmström, Lars ^LU ; Linder, Adam ^LU and Malmström, Johan ^LU (2021) In eLife 10.
- Contribution to journal › Article
Mark Systematic detection of functional proteoform groups from bottom-up proteomic datasets
Bludau, Isabell ; Frank, Max ; Dörig, Christian ; Cai, Yujia ; Heusel, Moritz ^LU ; Rosenberger, George ; Picotti, Paola ; Collins, Ben C. ; Röst, Hannes and Aebersold, Ruedi (2021) In Nature Communications 12(1).
- Contribution to journal › Article
Mark PCprophet : a framework for protein complex prediction and differential analysis using proteomic data
Fossati, Andrea ; Li, Chen ; Uliana, Federico ; Wendt, Fabian ; Frommelt, Fabian ; Sykacek, Peter ; Heusel, Moritz ^LU ; Hallal, Mahmoud ; Bludau, Isabell and Capraz, Tümay , et al. (2021) In Nature Methods 18(5). p.520-527
- Contribution to journal › Article

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